FastQCFastQC Report
Tue 18 Mar 2025
DB_099_CAMMD_CTTGTA_L001_R1_001.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameDB_099_CAMMD_CTTGTA_L001_R1_001.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14332278
Sequences flagged as poor quality0
Sequence length151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCTTGTAATCTCGTATGC215870.15061806643717068TruSeq Adapter, Index 12 (100% over 50bp)

[FAIL]Adapter Content

Adapter graph