From 1579c8932c6c45b0f6cf7553aa690e4ff36a6bb0 Mon Sep 17 00:00:00 2001 From: Dominik <dominik.brilhaus@hhu.de> Date: Fri, 26 Aug 2022 10:37:57 +0200 Subject: [PATCH] test without dev flag --- runs/merged_isa_metadata/run.cwl | 2 +- workflows/merge_isa_metadata/merge_isa_metadata.R | 2 +- workflows/merge_isa_metadata/workflow.cwl | 2 +- 3 files changed, 3 insertions(+), 3 deletions(-) diff --git a/runs/merged_isa_metadata/run.cwl b/runs/merged_isa_metadata/run.cwl index 978e240..2606463 100644 --- a/runs/merged_isa_metadata/run.cwl +++ b/runs/merged_isa_metadata/run.cwl @@ -1,5 +1,5 @@ #!/usr/bin/env cwl-runner -cwlVersion: v1.2.0-dev1 +cwlVersion: v1.2.0 class: Workflow inputs: in_isa_study: diff --git a/workflows/merge_isa_metadata/merge_isa_metadata.R b/workflows/merge_isa_metadata/merge_isa_metadata.R index aa074b3..a4784c8 100644 --- a/workflows/merge_isa_metadata/merge_isa_metadata.R +++ b/workflows/merge_isa_metadata/merge_isa_metadata.R @@ -4,7 +4,7 @@ #### CWL-independent tests ################################################ -# arc_root <- "~/gitlab_dataplant/samplearc_rnaseq/" +# arc_root <- "~/gitlab_dataplant/samplearc_rnaseq_adrian/" # in_isa_study <- "studies/TalinumFacultativeCAM/isa.study.xlsx:plant_growth" # in_isa_assay <- "assays/Talinum_RNASeq_minimal/isa.assay.xlsx:2EXT01_RNA:3ASY01_RNASeq" # out_folder <- "runs/merged_isa_metadata" diff --git a/workflows/merge_isa_metadata/workflow.cwl b/workflows/merge_isa_metadata/workflow.cwl index c6066ed..743e0f0 100644 --- a/workflows/merge_isa_metadata/workflow.cwl +++ b/workflows/merge_isa_metadata/workflow.cwl @@ -1,6 +1,6 @@ #!/usr/bin/env cwl-runner -cwlVersion: v1.2.0-dev1 +cwlVersion: v1.2.0 class: CommandLineTool hints: DockerRequirement: -- GitLab