diff --git a/runs/kallisto_collect/README.md b/runs/kallisto_collect/README.md
deleted file mode 100644
index 08cf2285fde86af02d22aee4681882eb2f1202e0..0000000000000000000000000000000000000000
--- a/runs/kallisto_collect/README.md
+++ /dev/null
@@ -1,13 +0,0 @@
-
-# cwltool README
-
-## First cd into the (runs) folder, with the .yml file
-
-cd /Users/dominikbrilhaus/gitlab_dataplant/samplearc_rnaseq_adrian/runs/kallisto_collect
-
-## Let it flow
-
-```bash
-### run with cwltool
-cwltool run.cwl kallisto_collect.yml
-```
diff --git a/runs/kallisto_index/README.md b/runs/kallisto_index/README.md
deleted file mode 100644
index ac67bff2d660c23469c2aa366693a9f42c3e7825..0000000000000000000000000000000000000000
--- a/runs/kallisto_index/README.md
+++ /dev/null
@@ -1,13 +0,0 @@
-
-# cwltool README
-
-## First cd into the (runs) folder, with the .yml file
-
-cd /Users/dominikbrilhaus/gitlab_dataplant/samplearc_rnaseq_adrian/runs/kallisto_index
-
-## Let it flow
-
-```bash
-### run with cwltool
-cwltool run.cwl kallisto_index.yml
-```
diff --git a/runs/kallisto_quant/README.md b/runs/kallisto_quant/README.md
deleted file mode 100644
index 86c10cd181b91cefc59660d5f030a5a9db80cb98..0000000000000000000000000000000000000000
--- a/runs/kallisto_quant/README.md
+++ /dev/null
@@ -1,13 +0,0 @@
-
-# cwltool README
-
-## First cd into the (runs) folder, with the .yml file
-
-cd /Users/dominikbrilhaus/gitlab_dataplant/samplearc_rnaseq_adrian/runs/kallisto_quant
-
-## Let it flow
-
-```bash
-### run with cwltool
-cwltool run.cwl kallisto_quant.yml
-```
diff --git a/runs/kallisto_sleuth/README.md b/runs/kallisto_sleuth/README.md
deleted file mode 100644
index 8fc55827f0968cd26b3f30105bad7eeed2767ba2..0000000000000000000000000000000000000000
--- a/runs/kallisto_sleuth/README.md
+++ /dev/null
@@ -1,13 +0,0 @@
-
-# cwltool README
-
-## First cd into the (runs) folder, with the .yml file
-
-cd /Users/dominikbrilhaus/gitlab_dataplant/samplearc_rnaseq_adrian/runs/kallisto_sleuth
-
-## Let it flow
-
-```bash
-### run with cwltool
-cwltool run.cwl kallisto_sleuth.yml
-```
diff --git a/runs/merged_isa_metadata/README.md b/runs/merged_isa_metadata/README.md
deleted file mode 100644
index d15e984b6c20eae3bc7bdcf9257a861d9709e694..0000000000000000000000000000000000000000
--- a/runs/merged_isa_metadata/README.md
+++ /dev/null
@@ -1,14 +0,0 @@
-
-# cwltool README
-
-## First cd into the (runs) folder, with the .yml file
-
-cd /Users/dominikbrilhaus/gitlab_dataplant/samplearc_rnaseq_adrian/runs/merged_isa_metadata
-
-
-## Let it flow
-
-```bash
-### run with cwltool
-cwltool run.cwl merge_isa_metadata.yml
-```
diff --git a/runs/shiny_prep/README.md b/runs/shiny_prep/README.md
deleted file mode 100644
index 5891cd81ea7b5e0b50b6ed842f9fea9896405630..0000000000000000000000000000000000000000
--- a/runs/shiny_prep/README.md
+++ /dev/null
@@ -1,13 +0,0 @@
-
-# cwltool README
-
-## First cd into the (runs) folder, with the .yml file
-
-cd /Users/dominikbrilhaus/gitlab_dataplant/samplearc_rnaseq_adrian/runs/shiny_prep
-
-## Let it flow
-
-```bash
-### run with cwltool
-cwltool run.cwl shiny_prep.yml
-```