From 4be391f09c803e5a68969d5a742315299a90cec1 Mon Sep 17 00:00:00 2001 From: Dominik <dominik.brilhaus@hhu.de> Date: Fri, 24 Mar 2023 10:33:57 +0100 Subject: [PATCH] remove READMEs --- runs/kallisto_collect/README.md | 13 ------------- runs/kallisto_index/README.md | 13 ------------- runs/kallisto_quant/README.md | 13 ------------- runs/kallisto_sleuth/README.md | 13 ------------- runs/merged_isa_metadata/README.md | 14 -------------- runs/shiny_prep/README.md | 13 ------------- 6 files changed, 79 deletions(-) delete mode 100644 runs/kallisto_collect/README.md delete mode 100644 runs/kallisto_index/README.md delete mode 100644 runs/kallisto_quant/README.md delete mode 100644 runs/kallisto_sleuth/README.md delete mode 100644 runs/merged_isa_metadata/README.md delete mode 100644 runs/shiny_prep/README.md diff --git a/runs/kallisto_collect/README.md b/runs/kallisto_collect/README.md deleted file mode 100644 index 08cf228..0000000 --- a/runs/kallisto_collect/README.md +++ /dev/null @@ -1,13 +0,0 @@ - -# cwltool README - -## First cd into the (runs) folder, with the .yml file - -cd /Users/dominikbrilhaus/gitlab_dataplant/samplearc_rnaseq_adrian/runs/kallisto_collect - -## Let it flow - -```bash -### run with cwltool -cwltool run.cwl kallisto_collect.yml -``` diff --git a/runs/kallisto_index/README.md b/runs/kallisto_index/README.md deleted file mode 100644 index ac67bff..0000000 --- a/runs/kallisto_index/README.md +++ /dev/null @@ -1,13 +0,0 @@ - -# cwltool README - -## First cd into the (runs) folder, with the .yml file - -cd /Users/dominikbrilhaus/gitlab_dataplant/samplearc_rnaseq_adrian/runs/kallisto_index - -## Let it flow - -```bash -### run with cwltool -cwltool run.cwl kallisto_index.yml -``` diff --git a/runs/kallisto_quant/README.md b/runs/kallisto_quant/README.md deleted file mode 100644 index 86c10cd..0000000 --- a/runs/kallisto_quant/README.md +++ /dev/null @@ -1,13 +0,0 @@ - -# cwltool README - -## First cd into the (runs) folder, with the .yml file - -cd /Users/dominikbrilhaus/gitlab_dataplant/samplearc_rnaseq_adrian/runs/kallisto_quant - -## Let it flow - -```bash -### run with cwltool -cwltool run.cwl kallisto_quant.yml -``` diff --git a/runs/kallisto_sleuth/README.md b/runs/kallisto_sleuth/README.md deleted file mode 100644 index 8fc5582..0000000 --- a/runs/kallisto_sleuth/README.md +++ /dev/null @@ -1,13 +0,0 @@ - -# cwltool README - -## First cd into the (runs) folder, with the .yml file - -cd /Users/dominikbrilhaus/gitlab_dataplant/samplearc_rnaseq_adrian/runs/kallisto_sleuth - -## Let it flow - -```bash -### run with cwltool -cwltool run.cwl kallisto_sleuth.yml -``` diff --git a/runs/merged_isa_metadata/README.md b/runs/merged_isa_metadata/README.md deleted file mode 100644 index d15e984..0000000 --- a/runs/merged_isa_metadata/README.md +++ /dev/null @@ -1,14 +0,0 @@ - -# cwltool README - -## First cd into the (runs) folder, with the .yml file - -cd /Users/dominikbrilhaus/gitlab_dataplant/samplearc_rnaseq_adrian/runs/merged_isa_metadata - - -## Let it flow - -```bash -### run with cwltool -cwltool run.cwl merge_isa_metadata.yml -``` diff --git a/runs/shiny_prep/README.md b/runs/shiny_prep/README.md deleted file mode 100644 index 5891cd8..0000000 --- a/runs/shiny_prep/README.md +++ /dev/null @@ -1,13 +0,0 @@ - -# cwltool README - -## First cd into the (runs) folder, with the .yml file - -cd /Users/dominikbrilhaus/gitlab_dataplant/samplearc_rnaseq_adrian/runs/shiny_prep - -## Let it flow - -```bash -### run with cwltool -cwltool run.cwl shiny_prep.yml -``` -- GitLab