From 87816a7d231ea2b52b6ddc5dcdf9a9452f14c1ae Mon Sep 17 00:00:00 2001
From: Jonathan Bauer <bauer@cs.uni-freiburg.de>
Date: Tue, 18 Mar 2025 16:36:50 +0000
Subject: [PATCH] Results for commit: 0bf412a493e4eb404757d623ce18abdbdd39ab7d
---
main/arc_specification@2.0.0-draft/badge.svg | 12 ++++++------
.../validation_report.xml | 2 +-
.../validation_summary.json | 2 +-
main/invenio@2.1.0/validation_report.xml | 2 +-
main/plant-growth@1.0.0/validation_report.xml | 2 +-
5 files changed, 10 insertions(+), 10 deletions(-)
diff --git a/main/arc_specification@2.0.0-draft/badge.svg b/main/arc_specification@2.0.0-draft/badge.svg
index 46b58da..a0004ba 100644
--- a/main/arc_specification@2.0.0-draft/badge.svg
+++ b/main/arc_specification@2.0.0-draft/badge.svg
@@ -1,23 +1,23 @@
<?xml version="1.0" encoding="UTF-8"?>
-<svg xmlns="http://www.w3.org/2000/svg" width="300" height="20">
+<svg xmlns="http://www.w3.org/2000/svg" width="235" height="20">
<linearGradient id="b" x2="0" y2="100%">
<stop offset="0" stop-color="#bbb" stop-opacity=".1"/>
<stop offset="1" stop-opacity=".1"/>
</linearGradient>
<mask id="1">
- <rect width="300" height="20" rx="3" fill="#fff"/>
+ <rect width="235" height="20" rx="3" fill="#fff"/>
</mask>
<g mask="url(#1)">
<path fill="#555" d="M0 0h192v20H0z"/>
- <path fill="#E05D44" d="M192 0h108v20H192z"/>
- <path fill="url(#b)" d="M0 0h300v20H0z"/>
+ <path fill="#4C1" d="M192 0h43v20H192z"/>
+ <path fill="url(#b)" d="M0 0h235v20H0z"/>
</g>
<g fill="#fff" text-anchor="middle" font-family="DejaVu Sans,Verdana,Geneva,sans-serif" font-size="11">
<text x="97" y="15" fill="#010101" fill-opacity=".3">arc_specification@2.0.0-draft</text>
<text x="96" y="14">arc_specification@2.0.0-draft</text>
</g>
<g fill="#fff" text-anchor="middle" font-family="DejaVu Sans,Verdana,Geneva,sans-serif" font-size="11">
- <text x="247" y="15" fill="#010101" fill-opacity=".3">1 Critical Errors</text>
- <text x="246" y="14">1 Critical Errors</text>
+ <text x="214.5" y="15" fill="#010101" fill-opacity=".3">17/17</text>
+ <text x="213.5" y="14">17/17</text>
</g>
</svg>
diff --git a/main/arc_specification@2.0.0-draft/validation_report.xml b/main/arc_specification@2.0.0-draft/validation_report.xml
index 50f7728..16c35a4 100644
--- a/main/arc_specification@2.0.0-draft/validation_report.xml
+++ b/main/arc_specification@2.0.0-draft/validation_report.xml
@@ -1 +1 @@
-<?xml version="1.0" encoding="utf-8"?><testsuites><testsuite name="arc-validate"><testcase name="[ Critical; Arc contains all files linked in studies ]" time="0.031"><failure message="The value 'assays/Talinum_RNASeq_minimal/isa.assay.xlsx' does not exist" /></testcase><testcase name="[ Critical; Arc is free of falesly parsed process graph headers in assays ]" time="0.073" /><testcase name="[ Critical; Arc contains assay in assay directory ]" time="0.069" /><testcase name="[ Critical; Arc contains study in studies directory ]" time="0.067" /><testcase name="[ Critical; Arc is free of falesly parsed process graph headers in studies ]" time="0.047" /><testcase name="[ Critical; Arc contains workflow in workflow directory ]" time="0.025" /><testcase name="[ Critical; Arc contains investigation file ]" time="0.013" /><testcase name="[ Critical; Arc contains Study optional Metadata fields ]" time="0.005" /><testcase name="[ Critical; Arc contains Studies Directory ]" time="0.003" /><testcase name="[ Critical; Arc contains Assays Directory ]" time="0.003" /><testcase name="[ Critical; Arc contains Runs Directory ]" time="0.003" /><testcase name="[ Critical; Arc contains Workflows Directory ]" time="0.003" /><testcase name="[ Critical; Arc contains all needed Investigation Metadata fields ]" time="0.003" /><testcase name="[ Critical; Arc contains all needed Study Metadata fields ]" time="0.002" /><testcase name="[ Critical; Arc contains all needed Assay Metadata fields ]" time="0.001" /><testcase name="[ Critical; Arc contains Investigation optional Metadata fields ]" time="0.001" /><testcase name="[ Critical; Arc contains all files linked in investigation ]" time="0.000" /></testsuite></testsuites>
\ No newline at end of file
+<?xml version="1.0" encoding="utf-8"?><testsuites><testsuite name="arc-validate"><testcase name="[ Critical; Arc is free of falesly parsed process graph headers in assays ]" time="0.079" /><testcase name="[ Critical; Arc contains study in studies directory ]" time="0.062" /><testcase name="[ Critical; Arc contains assay in assay directory ]" time="0.062" /><testcase name="[ Critical; Arc is free of falesly parsed process graph headers in studies ]" time="0.054" /><testcase name="[ Critical; Arc contains all files linked in studies ]" time="0.035" /><testcase name="[ Critical; Arc contains workflow in workflow directory ]" time="0.027" /><testcase name="[ Critical; Arc contains investigation file ]" time="0.011" /><testcase name="[ Critical; Arc contains Study optional Metadata fields ]" time="0.005" /><testcase name="[ Critical; Arc contains Studies Directory ]" time="0.003" /><testcase name="[ Critical; Arc contains Assays Directory ]" time="0.003" /><testcase name="[ Critical; Arc contains Runs Directory ]" time="0.003" /><testcase name="[ Critical; Arc contains Workflows Directory ]" time="0.003" /><testcase name="[ Critical; Arc contains all needed Investigation Metadata fields ]" time="0.003" /><testcase name="[ Critical; Arc contains all needed Study Metadata fields ]" time="0.002" /><testcase name="[ Critical; Arc contains all needed Assay Metadata fields ]" time="0.001" /><testcase name="[ Critical; Arc contains Investigation optional Metadata fields ]" time="0.001" /><testcase name="[ Critical; Arc contains all files linked in investigation ]" time="0.000" /></testsuite></testsuites>
\ No newline at end of file
diff --git a/main/arc_specification@2.0.0-draft/validation_summary.json b/main/arc_specification@2.0.0-draft/validation_summary.json
index b0a4969..2e4d530 100644
--- a/main/arc_specification@2.0.0-draft/validation_summary.json
+++ b/main/arc_specification@2.0.0-draft/validation_summary.json
@@ -1 +1 @@
-{"Critical":{"HasFailures":true,"Total":17,"Passed":16,"Failed":1,"Errored":0},"NonCritical":{"HasFailures":false,"Total":0,"Passed":0,"Failed":0,"Errored":0},"ValidationPackage":{"Name":"arc_specification","Version":"2.0.0-draft","Summary":"Validate whether an ARC conforms to Specification V2.0.0-draft","Description":"Validate whether an ARC conforms to Specification V2.0.0-draft. See the relevant spec at https://github.com/nfdi4plants/ARC-specification/blob/v2.0.0/ARC%20specification.md"}}
\ No newline at end of file
+{"Critical":{"HasFailures":false,"Total":17,"Passed":17,"Failed":0,"Errored":0},"NonCritical":{"HasFailures":false,"Total":0,"Passed":0,"Failed":0,"Errored":0},"ValidationPackage":{"Name":"arc_specification","Version":"2.0.0-draft","Summary":"Validate whether an ARC conforms to Specification V2.0.0-draft","Description":"Validate whether an ARC conforms to Specification V2.0.0-draft. See the relevant spec at https://github.com/nfdi4plants/ARC-specification/blob/v2.0.0/ARC%20specification.md"}}
\ No newline at end of file
diff --git a/main/invenio@2.1.0/validation_report.xml b/main/invenio@2.1.0/validation_report.xml
index 09eecea..299ae7b 100644
--- a/main/invenio@2.1.0/validation_report.xml
+++ b/main/invenio@2.1.0/validation_report.xml
@@ -1 +1 @@
-<?xml version="1.0" encoding="utf-8"?><testsuites><testsuite name="fsi"><testcase name="[ Critical; INVESTIGATION; Investigation Title ]" time="0.003" /><testcase name="[ Critical; INVESTIGATION; Investigation Description ]" time="0.003" /><testcase name="[ Critical; INVESTIGATION; Investigation Person First Name exists ]" time="0.003" /><testcase name="[ Critical; INVESTIGATION; Investigation Person First Name is not empty ]" time="0.003" /><testcase name="[ Critical; INVESTIGATION; Investigation Person Last Name exists ]" time="0.003" /><testcase name="[ Critical; INVESTIGATION; Investigation Person Last Name is not empty ]" time="0.003" /><testcase name="[ Critical; INVESTIGATION; Investigation Person Affiliation exists ]" time="0.003" /><testcase name="[ Critical; INVESTIGATION; Investigation Person Affiliation is not empty ]" time="0.003" /><testcase name="[ Critical; INVESTIGATION; Investigation Person Email ]" time="0.001" /><testcase name="[ Critical; INVESTIGATION; Investigation Person Email exists ]" time="0.000" /></testsuite></testsuites>
\ No newline at end of file
+<?xml version="1.0" encoding="utf-8"?><testsuites><testsuite name="fsi"><testcase name="[ Critical; INVESTIGATION; Investigation Title ]" time="0.003" /><testcase name="[ Critical; INVESTIGATION; Investigation Description ]" time="0.003" /><testcase name="[ Critical; INVESTIGATION; Investigation Person First Name exists ]" time="0.003" /><testcase name="[ Critical; INVESTIGATION; Investigation Person First Name is not empty ]" time="0.003" /><testcase name="[ Critical; INVESTIGATION; Investigation Person Last Name exists ]" time="0.003" /><testcase name="[ Critical; INVESTIGATION; Investigation Person Last Name is not empty ]" time="0.003" /><testcase name="[ Critical; INVESTIGATION; Investigation Person Affiliation exists ]" time="0.003" /><testcase name="[ Critical; INVESTIGATION; Investigation Person Affiliation is not empty ]" time="0.003" /><testcase name="[ Critical; INVESTIGATION; Investigation Person Email exists ]" time="0.000" /><testcase name="[ Critical; INVESTIGATION; Investigation Person Email ]" time="0.000" /></testsuite></testsuites>
\ No newline at end of file
diff --git a/main/plant-growth@1.0.0/validation_report.xml b/main/plant-growth@1.0.0/validation_report.xml
index 2304c93..4b6d059 100644
--- a/main/plant-growth@1.0.0/validation_report.xml
+++ b/main/plant-growth@1.0.0/validation_report.xml
@@ -1 +1 @@
-<?xml version="1.0" encoding="utf-8"?><testsuites><testsuite name="fsi"><testcase name="[ NonCritical; cases; plant_material: genotype ]" time="0.003"><failure message="table contains no genotype header" /></testcase><testcase name="[ NonCritical; cases; plant_material: Reference Time Point ]" time="0.003"><failure message="table contains no Reference Time Point header" /></testcase><testcase name="[ NonCritical; cases; plant_material: growth plot design ]" time="0.003"><failure message="table contains no growth plot design header" /></testcase><testcase name="[ NonCritical; cases; plant_material: study type ]" time="0.002"><failure message="table contains no study type header" /></testcase><testcase name="[ NonCritical; cases; plant_material: plant growth medium exposure ]" time="0.002"><failure message="table contains no plant growth medium exposure header" /></testcase><testcase name="[ NonCritical; cases; plant_material: humidity night ]" time="0.002"><failure message="table contains no humidity night header" /></testcase><testcase name="[ NonCritical; cases; plant_material: plant nutrient exposure ]" time="0.002"><failure message="table contains no plant nutrient exposure header" /></testcase><testcase name="[ NonCritical; cases; plant_material: abiotic plant exposure ]" time="0.002"><failure message="table contains no abiotic plant exposure header" /></testcase><testcase name="[ NonCritical; cases; plant_material: biotic plant exposure ]" time="0.000"><failure message="table contains no biotic plant exposure header" /></testcase><testcase name="[ Critical; cases; plant growth table ]" time="0.038" /><testcase name="[ Critical; cases; plant_material: organism ]" time="0.002" /><testcase name="[ Critical; cases; plant_material: growth day length ]" time="0.002" /><testcase name="[ Critical; cases; plant_material: light intensity exposure ]" time="0.002" /><testcase name="[ Critical; cases; plant_material: humidity day ]" time="0.002" /><testcase name="[ Critical; cases; plant_material: temperature day ]" time="0.002" /><testcase name="[ Critical; cases; plant_material: temperature night ]" time="0.002" /><testcase name="[ Critical; cases; plant_material: watering exposure ]" time="0.002" /></testsuite></testsuites>
\ No newline at end of file
+<?xml version="1.0" encoding="utf-8"?><testsuites><testsuite name="fsi"><testcase name="[ NonCritical; cases; plant_material: genotype ]" time="0.003"><failure message="table contains no genotype header" /></testcase><testcase name="[ NonCritical; cases; plant_material: study type ]" time="0.003"><failure message="table contains no study type header" /></testcase><testcase name="[ NonCritical; cases; plant_material: Reference Time Point ]" time="0.003"><failure message="table contains no Reference Time Point header" /></testcase><testcase name="[ NonCritical; cases; plant_material: growth plot design ]" time="0.003"><failure message="table contains no growth plot design header" /></testcase><testcase name="[ NonCritical; cases; plant_material: plant growth medium exposure ]" time="0.003"><failure message="table contains no plant growth medium exposure header" /></testcase><testcase name="[ NonCritical; cases; plant_material: humidity night ]" time="0.003"><failure message="table contains no humidity night header" /></testcase><testcase name="[ NonCritical; cases; plant_material: plant nutrient exposure ]" time="0.003"><failure message="table contains no plant nutrient exposure header" /></testcase><testcase name="[ NonCritical; cases; plant_material: abiotic plant exposure ]" time="0.002"><failure message="table contains no abiotic plant exposure header" /></testcase><testcase name="[ NonCritical; cases; plant_material: biotic plant exposure ]" time="0.000"><failure message="table contains no biotic plant exposure header" /></testcase><testcase name="[ Critical; cases; plant growth table ]" time="0.035" /><testcase name="[ Critical; cases; plant_material: organism ]" time="0.003" /><testcase name="[ Critical; cases; plant_material: growth day length ]" time="0.003" /><testcase name="[ Critical; cases; plant_material: light intensity exposure ]" time="0.003" /><testcase name="[ Critical; cases; plant_material: humidity day ]" time="0.003" /><testcase name="[ Critical; cases; plant_material: temperature day ]" time="0.003" /><testcase name="[ Critical; cases; plant_material: temperature night ]" time="0.003" /><testcase name="[ Critical; cases; plant_material: watering exposure ]" time="0.003" /></testsuite></testsuites>
\ No newline at end of file
--
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