diff --git a/README.md b/README.md
index 03e84e3d702ff73ab0776b9b90467815b28f0300..f7d0a510918d96a2fd7cb9ba33c04d92eca2389b 100644
--- a/README.md
+++ b/README.md
@@ -25,82 +25,82 @@ style assays/GCqTOF_targets fill:#ffc000
 
 subgraph studies/TalinumFacultativeCAM
 
-    DB_097 --[plant_material.md]--> CAM_01
-    DB_099 --[plant_material.md]--> CAM_02
-    DB_103 --[plant_material.md]--> CAM_03
-    DB_161 --[plant_material.md]--> reC3_01
-    DB_163 --[plant_material.md]--> reC3_02
-    DB_165 --[plant_material.md]--> reC3_03
+    DB_097 --plant_material.md--> CAM_01
+    DB_099 --plant_material.md--> CAM_02
+    DB_103 --plant_material.md--> CAM_03
+    DB_161 --plant_material.md--> reC3_01
+    DB_163 --plant_material.md--> reC3_02
+    DB_165 --plant_material.md--> reC3_03
 end
 
+
 subgraph assays/Talinum_RNASeq_minimal
 
-    CAM_01 --[rna_extraction.md]--> CAM_01_ext
-    CAM_02 --[rna_extraction.md]--> CAM_02_ext
-    CAM_03 --[rna_extraction.md]--> CAM_03_ext
-    reC3_01 --[rna_extraction.md]--> reC3_01_ext
-    reC3_02 --[rna_extraction.md]--> reC3_02_ext
-    reC3_03 --[rna_extraction.md]--> reC3_03_ext
-
-    CAM_01_ext --[illumina.md]--> DB_097_CAMMD_CAGATC_L001_R1_001.fastq.gz
-    CAM_02_ext --[illumina.md]--> DB_099_CAMMD_CTTGTA_L001_R1_001.fastq.gz
-    CAM_03_ext --[illumina.md]--> DB_103_CAMMD_AGTCAA_L001_R1_001.fastq.gz
-    reC3_01_ext --[illumina.md]--> DB_161_reC3MD_GTCCGC_L001_R1_001.fastq.gz
-    reC3_02_ext --[illumina.md]--> DB_163_reC3MD_GTGAAA_L001_R1_001.fastq.gz
-    reC3_03_ext --[illumina.md]--> DB_165_re-C3MD_GTGAAA_L002_R1_001.fastq.gz
+    CAM_01 --rna_extraction.md--> CAM_01_ext
+    CAM_02 --rna_extraction.md--> CAM_02_ext
+    CAM_03 --rna_extraction.md--> CAM_03_ext
+    reC3_01 --rna_extraction.md--> reC3_01_ext
+    reC3_02 --rna_extraction.md--> reC3_02_ext
+    reC3_03 --rna_extraction.md--> reC3_03_ext
+
+    CAM_01_ext --illumina.md--> DB_097_CAMMD_CAGATC_L001_R1_001.fastq.gz
+    CAM_02_ext --illumina.md--> DB_099_CAMMD_CTTGTA_L001_R1_001.fastq.gz
+    CAM_03_ext --illumina.md--> DB_103_CAMMD_AGTCAA_L001_R1_001.fastq.gz
+    reC3_01_ext --illumina.md--> DB_161_reC3MD_GTCCGC_L001_R1_001.fastq.gz
+    reC3_02_ext --illumina.md--> DB_163_reC3MD_GTGAAA_L001_R1_001.fastq.gz
+    reC3_03_ext --illumina.md--> DB_165_re-C3MD_GTGAAA_L002_R1_001.fastq.gz
 end
 
 subgraph assays/GCqTOF_targets
    
-    CAM_01 --[metabolite_extraction.md]--> DB23
-    CAM_02 --[metabolite_extraction.md]--> DB24
-    CAM_03 --[metabolite_extraction.md]--> DB26
-    reC3_01 --[metabolite_extraction.md]--> DB39
-    reC3_02 --[metabolite_extraction.md]--> DB40
-    reC3_03 --[metabolite_extraction.md]--> DB41
-
-    Std.Mix5µM --[gas_chromatography.md]--> 150112_03
-    Std.Mix5µM --[gas_chromatography.md]--> 150112_04
-    blank1 --[gas_chromatography.md]--> 150112_15
-    blank1 --[gas_chromatography.md]--> 150112_16
-    DB23 --[gas_chromatography.md]--> 150112_55
-    DB23 --[gas_chromatography.md]--> 150112_56
-    DB24 --[gas_chromatography.md]--> 150112_61
-    DB24 --[gas_chromatography.md]--> 150112_62
-    DB26 --[gas_chromatography.md]--> 150112_65
-    DB26 --[gas_chromatography.md]--> 150112_66
-    Std.Mix5µM --[gas_chromatography.md]--> 150115_03
-    Std.Mix5µM --[gas_chromatography.md]--> 150115_04
-    DB39 --[gas_chromatography.md]--> 150115_11
-    DB39 --[gas_chromatography.md]--> 150115_12
-    DB40 --[gas_chromatography.md]--> 150115_13
-    DB40 --[gas_chromatography.md]--> 150115_14
-    DB41 --[gas_chromatography.md]--> 150115_15
-    DB41 --[gas_chromatography.md]--> 150115_16
-    blank2 --[gas_chromatography.md]--> 150115_25
-    blank2 --[gas_chromatography.md]--> 150115_26
-
-    150112_03 --[mass_spec.md]--> 150112_03.D
-    150112_04 --[mass_spec.md]--> 150112_04.D
-    150112_15 --[mass_spec.md]--> 150112_15.D
-    150112_16 --[mass_spec.md]--> 150112_16.D
-    150112_55 --[mass_spec.md]--> 150112_55.D
-    150112_56 --[mass_spec.md]--> 150112_56.D
-    150112_61 --[mass_spec.md]--> 150112_61.D
-    150112_62 --[mass_spec.md]--> 150112_62.D
-    150112_65 --[mass_spec.md]--> 150112_65.D
-    150112_66 --[mass_spec.md]--> 150112_66.D
-    150115_03 --[mass_spec.md]--> 150115_03.D
-    150115_04 --[mass_spec.md]--> 150115_04.D
-    150115_11 --[mass_spec.md]--> 150115_11.D
-    150115_12 --[mass_spec.md]--> 150115_12.D
-    150115_13 --[mass_spec.md]--> 150115_13.D
-    150115_14 --[mass_spec.md]--> 150115_14.D
-    150115_15 --[mass_spec.md]--> 150115_15.D
-    150115_16 --[mass_spec.md]--> 150115_16.D
-    150115_25 --[mass_spec.md]--> 150115_25.D
-    150115_26 --[mass_spec.md]--> 150115_26.D
+    CAM_01 --metabolite_extraction.md--> DB23
+    CAM_02 --metabolite_extraction.md--> DB24
+    CAM_03 --metabolite_extraction.md--> DB26
+    reC3_01 --metabolite_extraction.md--> DB39
+    reC3_02 --metabolite_extraction.md--> DB40
+    reC3_03 --metabolite_extraction.md--> DB41
+
+    Std.Mix5µM --gas_chromatography.md--> 150112_03
+    Std.Mix5µM --gas_chromatography.md--> 150112_04
+    blank1 --gas_chromatography.md--> 150112_15
+    blank1 --gas_chromatography.md--> 150112_16
+    DB23 --gas_chromatography.md--> 150112_55
+    DB23 --gas_chromatography.md--> 150112_56
+    DB24 --gas_chromatography.md--> 150112_61
+    DB24 --gas_chromatography.md--> 150112_62
+    DB26 --gas_chromatography.md--> 150112_65
+    DB26 --gas_chromatography.md--> 150112_66
+    Std.Mix5µM --gas_chromatography.md--> 150115_03
+    Std.Mix5µM --gas_chromatography.md--> 150115_04
+    DB39 --gas_chromatography.md--> 150115_11
+    DB39 --gas_chromatography.md--> 150115_12
+    DB40 --gas_chromatography.md--> 150115_13
+    DB40 --gas_chromatography.md--> 150115_14
+    DB41 --gas_chromatography.md--> 150115_15
+    DB41 --gas_chromatography.md--> 150115_16
+    blank2 --gas_chromatography.md--> 150115_25
+    blank2 --gas_chromatography.md--> 150115_26
+
+    150112_03 --mass_spec.md--> 150112_03.D
+    150112_04 --mass_spec.md--> 150112_04.D
+    150112_15 --mass_spec.md--> 150112_15.D
+    150112_16 --mass_spec.md--> 150112_16.D
+    150112_55 --mass_spec.md--> 150112_55.D
+    150112_56 --mass_spec.md--> 150112_56.D
+    150112_61 --mass_spec.md--> 150112_61.D
+    150112_62 --mass_spec.md--> 150112_62.D
+    150112_65 --mass_spec.md--> 150112_65.D
+    150112_66 --mass_spec.md--> 150112_66.D
+    150115_03 --mass_spec.md--> 150115_03.D
+    150115_04 --mass_spec.md--> 150115_04.D
+    150115_11 --mass_spec.md--> 150115_11.D
+    150115_12 --mass_spec.md--> 150115_12.D
+    150115_13 --mass_spec.md--> 150115_13.D
+    150115_14 --mass_spec.md--> 150115_14.D
+    150115_15 --mass_spec.md--> 150115_15.D
+    150115_16 --mass_spec.md--> 150115_16.D
+    150115_25 --mass_spec.md--> 150115_25.D
+    150115_26 --mass_spec.md--> 150115_26.D
 
 end
-
 ```