diff --git a/arc.cwl b/arc.cwl index e42113e4885aa5aae903714b01c970a16dd04f25..e0a4ce99f8aec508b687d0eeeb0822d7e04c943a 100644 --- a/arc.cwl +++ b/arc.cwl @@ -60,13 +60,13 @@ steps: assayName: isaSampleToRawDataSeq_assayName startingNodeNum: isaSampleToRawDataSeq_startingNodeNum outName: isaSampleToRawDataSeq_outName - out: [output] + out: [sampleseqCsv, sampleseqXlsx] sleuth: run: runs/sleuth/run.cwl in: inKallistoResults: kallisto/kallistoOutDir - inMetadataFile: isaSampleToRawDataSeq/output + inMetadataFile: isaSampleToRawDataSeq/sampleseqCsv inMetadataSample: sleuth_inMetadataSample inMetadataFactorList: sleuth_inMetadataFactorList inMetadataDataCol: sleuth_inMetadataDataCol