From d032534ba65bedcdd3a51fc1450164e99a07351a Mon Sep 17 00:00:00 2001
From: Jonathan Bauer <bauer@cs.uni-freiburg.de>
Date: Mon, 4 Nov 2024 17:01:28 +0000
Subject: [PATCH] Results for commit: 28e57415662c2ebdaa85063425ff340362064f6e
---
.../validation_report.xml | 2 +-
deseq2/invenio@2.0.1/badge.svg | 23 +++++++++++++++++++
deseq2/invenio@2.0.1/validation_report.xml | 1 +
deseq2/invenio@2.0.1/validation_summary.json | 1 +
4 files changed, 26 insertions(+), 1 deletion(-)
create mode 100644 deseq2/invenio@2.0.1/badge.svg
create mode 100644 deseq2/invenio@2.0.1/validation_report.xml
create mode 100644 deseq2/invenio@2.0.1/validation_summary.json
diff --git a/deseq2/arc_specification@2.0.0-draft/validation_report.xml b/deseq2/arc_specification@2.0.0-draft/validation_report.xml
index 3ded7fe..29d7d35 100644
--- a/deseq2/arc_specification@2.0.0-draft/validation_report.xml
+++ b/deseq2/arc_specification@2.0.0-draft/validation_report.xml
@@ -1 +1 @@
-<?xml version="1.0" encoding="utf-8"?><testsuites><testsuite name="arc-validate"><testcase name="[ Critical; Arc contains workflow in workflow directory ]" time="0.085"><failure message="The value 'paramCollection' The does not satisfy the predicate." /></testcase><testcase name="[ Critical; Arc contains study in studies directory ]" time="0.103" /><testcase name="[ Critical; Arc contains assay in assay directory ]" time="0.103" /><testcase name="[ Critical; Arc is free of falesly parsed process graph headers in assays ]" time="0.079" /><testcase name="[ Critical; Arc is free of falesly parsed process graph headers in studies ]" time="0.048" /><testcase name="[ Critical; Arc contains all files linked in studies ]" time="0.035" /><testcase name="[ Critical; Arc contains investigation file ]" time="0.028" /><testcase name="[ Critical; Arc contains Study optional Metadata fields ]" time="0.007" /><testcase name="[ Critical; Arc contains all needed Study Metadata fields ]" time="0.005" /><testcase name="[ Critical; Arc contains all needed Investigation Metadata fields ]" time="0.004" /><testcase name="[ Critical; Arc contains Studies Directory ]" time="0.003" /><testcase name="[ Critical; Arc contains Assays Directory ]" time="0.003" /><testcase name="[ Critical; Arc contains Runs Directory ]" time="0.003" /><testcase name="[ Critical; Arc contains Workflows Directory ]" time="0.003" /><testcase name="[ Critical; Arc contains Investigation optional Metadata fields ]" time="0.002" /><testcase name="[ Critical; Arc contains all needed Assay Metadata fields ]" time="0.001" /><testcase name="[ Critical; Arc contains all files linked in investigation ]" time="0.000" /></testsuite></testsuites>
\ No newline at end of file
+<?xml version="1.0" encoding="utf-8"?><testsuites><testsuite name="arc-validate"><testcase name="[ Critical; Arc contains workflow in workflow directory ]" time="0.057"><failure message="The value 'paramCollection' The does not satisfy the predicate." /></testcase><testcase name="[ Critical; Arc is free of falesly parsed process graph headers in assays ]" time="0.077" /><testcase name="[ Critical; Arc contains study in studies directory ]" time="0.076" /><testcase name="[ Critical; Arc contains assay in assay directory ]" time="0.076" /><testcase name="[ Critical; Arc is free of falesly parsed process graph headers in studies ]" time="0.049" /><testcase name="[ Critical; Arc contains all files linked in studies ]" time="0.030" /><testcase name="[ Critical; Arc contains investigation file ]" time="0.011" /><testcase name="[ Critical; Arc contains all needed Investigation Metadata fields ]" time="0.008" /><testcase name="[ Critical; Arc contains all needed Study Metadata fields ]" time="0.006" /><testcase name="[ Critical; Arc contains Study optional Metadata fields ]" time="0.006" /><testcase name="[ Critical; Arc contains all needed Assay Metadata fields ]" time="0.004" /><testcase name="[ Critical; Arc contains Studies Directory ]" time="0.003" /><testcase name="[ Critical; Arc contains Assays Directory ]" time="0.003" /><testcase name="[ Critical; Arc contains Runs Directory ]" time="0.003" /><testcase name="[ Critical; Arc contains Workflows Directory ]" time="0.003" /><testcase name="[ Critical; Arc contains Investigation optional Metadata fields ]" time="0.001" /><testcase name="[ Critical; Arc contains all files linked in investigation ]" time="0.000" /></testsuite></testsuites>
\ No newline at end of file
diff --git a/deseq2/invenio@2.0.1/badge.svg b/deseq2/invenio@2.0.1/badge.svg
new file mode 100644
index 0000000..f3752c5
--- /dev/null
+++ b/deseq2/invenio@2.0.1/badge.svg
@@ -0,0 +1,23 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<svg xmlns="http://www.w3.org/2000/svg" width="96" height="20">
+ <linearGradient id="b" x2="0" y2="100%">
+ <stop offset="0" stop-color="#bbb" stop-opacity=".1"/>
+ <stop offset="1" stop-opacity=".1"/>
+ </linearGradient>
+ <mask id="1">
+ <rect width="96" height="20" rx="3" fill="#fff"/>
+ </mask>
+ <g mask="url(#1)">
+ <path fill="#555" d="M0 0h53v20H0z"/>
+ <path fill="#4C1" d="M53 0h43v20H53z"/>
+ <path fill="url(#b)" d="M0 0h96v20H0z"/>
+ </g>
+ <g fill="#fff" text-anchor="middle" font-family="DejaVu Sans,Verdana,Geneva,sans-serif" font-size="11">
+ <text x="27.5" y="15" fill="#010101" fill-opacity=".3">invenio</text>
+ <text x="26.5" y="14">invenio</text>
+ </g>
+ <g fill="#fff" text-anchor="middle" font-family="DejaVu Sans,Verdana,Geneva,sans-serif" font-size="11">
+ <text x="75.5" y="15" fill="#010101" fill-opacity=".3">10/10</text>
+ <text x="74.5" y="14">10/10</text>
+ </g>
+</svg>
diff --git a/deseq2/invenio@2.0.1/validation_report.xml b/deseq2/invenio@2.0.1/validation_report.xml
new file mode 100644
index 0000000..916c07e
--- /dev/null
+++ b/deseq2/invenio@2.0.1/validation_report.xml
@@ -0,0 +1 @@
+<?xml version="1.0" encoding="utf-8"?><testsuites><testsuite name="fsi"><testcase name="[ Critical; INVESTIGATION; Investigation Title ]" time="0.003" /><testcase name="[ Critical; INVESTIGATION; Investigation Description ]" time="0.003" /><testcase name="[ Critical; INVESTIGATION; Investigation Person First Name is not empty ]" time="0.003" /><testcase name="[ Critical; INVESTIGATION; Investigation Person Affiliation exists ]" time="0.003" /><testcase name="[ Critical; INVESTIGATION; Investigation Person Affiliation is not empty ]" time="0.003" /><testcase name="[ Critical; INVESTIGATION; Investigation Person First Name exists ]" time="0.002" /><testcase name="[ Critical; INVESTIGATION; Investigation Person Last Name exists ]" time="0.002" /><testcase name="[ Critical; INVESTIGATION; Investigation Person Last Name is not empty ]" time="0.002" /><testcase name="[ Critical; INVESTIGATION; Investigation Person Email ]" time="0.001" /><testcase name="[ Critical; INVESTIGATION; Investigation Person Email exists ]" time="0.000" /></testsuite></testsuites>
\ No newline at end of file
diff --git a/deseq2/invenio@2.0.1/validation_summary.json b/deseq2/invenio@2.0.1/validation_summary.json
new file mode 100644
index 0000000..776a668
--- /dev/null
+++ b/deseq2/invenio@2.0.1/validation_summary.json
@@ -0,0 +1 @@
+{"Critical":{"HasFailures":false,"Total":10,"Passed":10,"Failed":0,"Errored":0},"NonCritical":{"HasFailures":false,"Total":0,"Passed":0,"Failed":0,"Errored":0},"ValidationPackage":{"Name":"invenio","Version":"2.0.1","Summary":"Validates if the ARC contains the necessary metadata to be publishable via Invenio.","Description":"Validates if the ARC contains the necessary metadata to be publishable via Invenio.\nThe following metadata is required:\n- Investigation has title and description\n- All persons in Investigation Contacts must have a name, last name, affiliation and valid email\n"}}
\ No newline at end of file
--
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