From badf6e8a17ab0dca02b59f8ae33bea0611d1285d Mon Sep 17 00:00:00 2001
From: Viktoria Petrova <vipet103@hhu.de>
Date: Fri, 17 Jan 2025 12:12:01 +0100
Subject: [PATCH] add figures to dataset
---
.gitattributes | 3 +++
assays/StatisticalAnalysis/dataset/README.md | 4 ++--
assays/StatisticalAnalysis/dataset/erae198_fig1.jpeg | 3 +++
assays/StatisticalAnalysis/dataset/erae198_fig10.jpeg | 3 +++
assays/StatisticalAnalysis/dataset/erae198_fig2.jpeg | 3 +++
assays/StatisticalAnalysis/dataset/erae198_fig3.jpeg | 3 +++
assays/StatisticalAnalysis/dataset/erae198_fig4.jpeg | 3 +++
assays/StatisticalAnalysis/dataset/erae198_fig5.jpeg | 3 +++
assays/StatisticalAnalysis/dataset/erae198_fig6.jpeg | 3 +++
assays/StatisticalAnalysis/dataset/erae198_fig7.jpeg | 3 +++
assays/StatisticalAnalysis/dataset/erae198_fig8.jpeg | 3 +++
assays/StatisticalAnalysis/dataset/erae198_fig9.jpeg | 3 +++
.../StatisticalAnalysis/protocols/EstimationOfHeritability.md | 2 +-
13 files changed, 36 insertions(+), 3 deletions(-)
create mode 100644 assays/StatisticalAnalysis/dataset/erae198_fig1.jpeg
create mode 100644 assays/StatisticalAnalysis/dataset/erae198_fig10.jpeg
create mode 100644 assays/StatisticalAnalysis/dataset/erae198_fig2.jpeg
create mode 100644 assays/StatisticalAnalysis/dataset/erae198_fig3.jpeg
create mode 100644 assays/StatisticalAnalysis/dataset/erae198_fig4.jpeg
create mode 100644 assays/StatisticalAnalysis/dataset/erae198_fig5.jpeg
create mode 100644 assays/StatisticalAnalysis/dataset/erae198_fig6.jpeg
create mode 100644 assays/StatisticalAnalysis/dataset/erae198_fig7.jpeg
create mode 100644 assays/StatisticalAnalysis/dataset/erae198_fig8.jpeg
create mode 100644 assays/StatisticalAnalysis/dataset/erae198_fig9.jpeg
diff --git a/.gitattributes b/.gitattributes
index 56ee1a3..27f1a43 100644
--- a/.gitattributes
+++ b/.gitattributes
@@ -3,3 +3,6 @@
_publication/erae198_fig1.jpeg filter=lfs diff=lfs merge=lfs -text
_publication/Gao[[:space:]]et[[:space:]]al._2024[[:space:]]-[[:space:]]Exploring[[:space:]]natural[[:space:]]genetic[[:space:]]variation[[:space:]]in[[:space:]]photosynthe.pdf filter=lfs diff=lfs merge=lfs -text
_publication/erae198_suppl_supplementary_figures_s1-s7.pdf filter=lfs diff=lfs merge=lfs -text
+assays/StatisticalAnalysis/dataset/erae198_fig1.jpeg filter=lfs diff=lfs merge=lfs -text
+assays/StatisticalAnalysis/dataset/erae198_fig5.jpeg filter=lfs diff=lfs merge=lfs -text
+assays/StatisticalAnalysis/dataset/erae198_fig6.jpeg filter=lfs diff=lfs merge=lfs -text
diff --git a/assays/StatisticalAnalysis/dataset/README.md b/assays/StatisticalAnalysis/dataset/README.md
index 00d2c1a..f5bf639 100644
--- a/assays/StatisticalAnalysis/dataset/README.md
+++ b/assays/StatisticalAnalysis/dataset/README.md
@@ -1,3 +1,3 @@
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diff --git a/assays/StatisticalAnalysis/protocols/EstimationOfHeritability.md b/assays/StatisticalAnalysis/protocols/EstimationOfHeritability.md
index 8757d20..42fd454 100644
--- a/assays/StatisticalAnalysis/protocols/EstimationOfHeritability.md
+++ b/assays/StatisticalAnalysis/protocols/EstimationOfHeritability.md
@@ -9,7 +9,7 @@ where $\sigma_G^2$ was the genotypic variance calculated based on the above mode
To avoid the effect of the varying number of replicates, the $H^2$ of photosynthesis-related parameters was estimated for each developmental stage based on the following equation:
**(9)**
-$$H^2 = \frac{\sigma_G^2}{\sigma_G^2 + \frac{\sigma_{G:E}^2}{5} + \frac{\sigma_e^2}{5}}
+$$H^2 = \frac{\sigma_G^2}{\sigma_G^2 + \frac{\sigma_{G:E}^2}{5} + \frac{\sigma_e^2}{5}}$$
where $\sigma_{G:E}^2$ was the variance of the interaction of barley inbreds and environments, and $\sigma_e^2$ was the residual variance.
We used the statistical software R to perform all statistical analyses.
\ No newline at end of file
--
GitLab