From 77eb565321edbb3c1dc85384c3c281a8fcd719b9 Mon Sep 17 00:00:00 2001
From: vipet103 <vipet103@hhu.de>
Date: Thu, 21 Dec 2023 11:54:22 +0100
Subject: [PATCH] edit mermaid graph
---
README.md | 34 ++++++++++++++++++-
... real-time PCR (qRT-PCR).md => qRT-PCR.md} | 0
2 files changed, 33 insertions(+), 1 deletion(-)
rename assays/qPCR/protocols/{Quantitative real-time PCR (qRT-PCR).md => qRT-PCR.md} (100%)
diff --git a/README.md b/README.md
index a2b2344..58fc288 100644
--- a/README.md
+++ b/README.md
@@ -27,6 +27,8 @@ class p publication;
class a1,a2,a3,a4,a5,a6,a7 assay;
```
+
+
``` mermaid
flowchart LR
subgraph studies\PlasmidAndStrainConstruction
@@ -138,4 +140,34 @@ end
subgraph assays\MetabolicModeling
model(MetabolicModeling.md)
end
-studies\PlasmidAndStrainConstruction-->model
\ No newline at end of file
+studies\PlasmidAndStrainConstruction-->model
+
+subgraph assays\cPCR
+direction LR
+str1--->|cPCR|cPCR1(dxs_cPCR)
+str2--->|cPCR|cPCR2(ispD_cPCR)
+str3--->|cPCR|cPCR3(ispE_cPCR)
+str4--->|cPCR|cPCR4(ispF_cPCR)
+str5--->|cPCR|cPCR5(ispG_cPCR)
+str6--->|cPCR|cPCR6(ispH_cPCR)
+str7--->|cPCR|cPCR7(Idi_cPCR)
+str8--->|cPCR|cPCR8(sqs_cPCR)
+str9--->|cPCR|cPCR9(crtE_cPCR)
+str10--->|cPCR|cPCR10(gap2_cPCR)
+str11--->|cPCR|cPCR11(pyrK_cPCR)
+str12--->|cPCR|cPCR12(tpi_cPCR)
+end
+
+subgraph assays\qPCR
+direction LR
+clt1-->|qRT-PCR.md|qPCR1(dxs_qPCR)
+clt8-->|qRT-PCR.md|qPCR8(sqs_qPCR)
+rpoA(rpoA)-->|qRT-PCR.md|qPCR(rpoA_qPCR)
+end
+
+%%Define styles
+ classDef study fill:#ABEBC6,stroke:#0E6655,color:#010802,stroke-width:2px;
+ classDef assay fill:#FFF59D,stroke:#E67E22 ,color:#010802,stroke-width:2px;
+%%Assign styles
+class studies\PlasmidAndStrainConstruction,studies\KnoopAndSteuer-2015,studies\Synechocystis,studies\MeasurementsOfSqualene,studies\Englund-2014 study;
+class assays\qPCR,assays\cPCR,assays\MetabolicModeling,assays\GC-MSMeasurementsForTheQuantificationOfSqualene,assays\DCWMeasuremnet,assays\AbsorptionSpectraAndODMeasurements assay;
\ No newline at end of file
diff --git a/assays/qPCR/protocols/Quantitative real-time PCR (qRT-PCR).md b/assays/qPCR/protocols/qRT-PCR.md
similarity index 100%
rename from assays/qPCR/protocols/Quantitative real-time PCR (qRT-PCR).md
rename to assays/qPCR/protocols/qRT-PCR.md
--
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