diff --git a/studies/TranscriptomeDataSets/README.md b/studies/TranscriptomeDataSets/README.md index e69de29bb2d1d6434b8b29ae775ad8c2e48c5391..40a2c583bcb8acde81c485bca22310f900175e7a 100644 --- a/studies/TranscriptomeDataSets/README.md +++ b/studies/TranscriptomeDataSets/README.md @@ -0,0 +1,15 @@ +# Transcriptome Data Sets + + + +**Figure S1: Composition of data set** + +This study is based on 315 transcriptomes (133 from tomato (a), 182 from potato (b)) and includes +seven plant pathogen domains (bacteria, fungi, oomycetes, nematodes, viroids, viruses, insects). The +pathogens include common pests of tomato and potato as well as mycorrhizal forming organisms and +potential biocontrol agents (green cross/grey text). The pathogens belong to biotrophic (green circle), +necrotrophic (brown circle), hemibiotrophic (green-brown circle) as well as unknown (grey circle) or +none categorical (pink circle) pathogens. We included transcriptomes from root, fruit, stem and leaves +of resistant (shield) as well as susceptible cultivars (crossed-out shield) that were generated at 12 +different time points (0 dpi until the end of the life cycle of the plant). Cultivars ranged from 13 (a) to +15 (b) per host. \ No newline at end of file