From c561ed4c7e100d79b9fde9fc05e510e6aaa5de3b Mon Sep 17 00:00:00 2001 From: Viktoria Petrova <vipet103@hhu.de> Date: Sat, 5 Oct 2024 14:09:45 +0200 Subject: [PATCH] add README to study --- studies/TranscriptomeDataSets/README.md | 15 +++++++++++++++ 1 file changed, 15 insertions(+) diff --git a/studies/TranscriptomeDataSets/README.md b/studies/TranscriptomeDataSets/README.md index e69de29..40a2c58 100644 --- a/studies/TranscriptomeDataSets/README.md +++ b/studies/TranscriptomeDataSets/README.md @@ -0,0 +1,15 @@ +# Transcriptome Data Sets + + + +**Figure S1: Composition of data set** + +This study is based on 315 transcriptomes (133 from tomato (a), 182 from potato (b)) and includes +seven plant pathogen domains (bacteria, fungi, oomycetes, nematodes, viroids, viruses, insects). The +pathogens include common pests of tomato and potato as well as mycorrhizal forming organisms and +potential biocontrol agents (green cross/grey text). The pathogens belong to biotrophic (green circle), +necrotrophic (brown circle), hemibiotrophic (green-brown circle) as well as unknown (grey circle) or +none categorical (pink circle) pathogens. We included transcriptomes from root, fruit, stem and leaves +of resistant (shield) as well as susceptible cultivars (crossed-out shield) that were generated at 12 +different time points (0 dpi until the end of the life cycle of the plant). Cultivars ranged from 13 (a) to +15 (b) per host. \ No newline at end of file -- GitLab