diff --git a/assays/Culture-independentCommunityProfiling/README.md b/assays/Culture-independentCommunityProfiling/README.md new file mode 100644 index 0000000000000000000000000000000000000000..e69de29bb2d1d6434b8b29ae775ad8c2e48c5391 diff --git a/assays/Culture-independentCommunityProfiling/dataset/.gitkeep b/assays/Culture-independentCommunityProfiling/dataset/.gitkeep new file mode 100644 index 0000000000000000000000000000000000000000..e69de29bb2d1d6434b8b29ae775ad8c2e48c5391 diff --git a/assays/Culture-independentCommunityProfiling/isa.assay.xlsx b/assays/Culture-independentCommunityProfiling/isa.assay.xlsx new file mode 100644 index 0000000000000000000000000000000000000000..264498e5c9b281fba58e4b4fb7dbab5204759eaa Binary files /dev/null and b/assays/Culture-independentCommunityProfiling/isa.assay.xlsx differ diff --git a/assays/Culture-independentCommunityProfiling/protocols/.gitkeep b/assays/Culture-independentCommunityProfiling/protocols/.gitkeep new file mode 100644 index 0000000000000000000000000000000000000000..e69de29bb2d1d6434b8b29ae775ad8c2e48c5391 diff --git a/assays/Culture-independentCommunityProfiling/protocols/Culture-independentCommunityProfilingProtocol.md b/assays/Culture-independentCommunityProfiling/protocols/Culture-independentCommunityProfilingProtocol.md new file mode 100644 index 0000000000000000000000000000000000000000..090b4a9c3cf41af9730f4f01a3f1bbfb0ff46d89 --- /dev/null +++ b/assays/Culture-independentCommunityProfiling/protocols/Culture-independentCommunityProfilingProtocol.md @@ -0,0 +1,3 @@ +## Culture-independent community profiling + +Bacterial communities were profiled by amplicon sequencing of the variable v5-v7 regions of the bacterial 16S rRNA gene. Library preparation for Illumina MiSeq sequencing was performed as described previously (Duran, P. et al., 2018). In all experiments, multiplexing of samples was performed by double-indexing (barcoded forward and reverse oligonucleotides for 16S rRNA gene amplification). \ No newline at end of file