From a9f5d3b20e523f0642afb6a96daa5b21b5f5eee7 Mon Sep 17 00:00:00 2001
From: Viktoria Petrova <vipet103@hhu.de>
Date: Sat, 2 Nov 2024 13:36:46 +0100
Subject: [PATCH] add greenhouse experiment assay and protocol

---
 assays/GreenhouseExperiment/README.md            |   0
 assays/GreenhouseExperiment/dataset/.gitkeep     |   0
 assays/GreenhouseExperiment/isa.assay.xlsx       | Bin 0 -> 6900 bytes
 assays/GreenhouseExperiment/protocols/.gitkeep   |   0
 .../protocols/GreenhouseExperimentProtocol.md    |   3 +++
 5 files changed, 3 insertions(+)
 create mode 100644 assays/GreenhouseExperiment/README.md
 create mode 100644 assays/GreenhouseExperiment/dataset/.gitkeep
 create mode 100644 assays/GreenhouseExperiment/isa.assay.xlsx
 create mode 100644 assays/GreenhouseExperiment/protocols/.gitkeep
 create mode 100644 assays/GreenhouseExperiment/protocols/GreenhouseExperimentProtocol.md

diff --git a/assays/GreenhouseExperiment/README.md b/assays/GreenhouseExperiment/README.md
new file mode 100644
index 0000000..e69de29
diff --git a/assays/GreenhouseExperiment/dataset/.gitkeep b/assays/GreenhouseExperiment/dataset/.gitkeep
new file mode 100644
index 0000000..e69de29
diff --git a/assays/GreenhouseExperiment/isa.assay.xlsx b/assays/GreenhouseExperiment/isa.assay.xlsx
new file mode 100644
index 0000000000000000000000000000000000000000..ce191913f0b646157de87ac2d0afa66f09496f14
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diff --git a/assays/GreenhouseExperiment/protocols/.gitkeep b/assays/GreenhouseExperiment/protocols/.gitkeep
new file mode 100644
index 0000000..e69de29
diff --git a/assays/GreenhouseExperiment/protocols/GreenhouseExperimentProtocol.md b/assays/GreenhouseExperiment/protocols/GreenhouseExperimentProtocol.md
new file mode 100644
index 0000000..66f4909
--- /dev/null
+++ b/assays/GreenhouseExperiment/protocols/GreenhouseExperimentProtocol.md
@@ -0,0 +1,3 @@
+## Greenhouse experiment
+
+*Lj* Gifu and *At* Col-0 were grown for 5 weeks in CAS soil (batch 15 from January 2020) in 7 × 7 cm pots alongside unplanted control pots under short-day conditions. Pots were watered with sterile water from the bottom as needed. Root, rhizosphere and soil samples were harvested and processed as described previously (Thiergart, T. et al., 2020). In total, 15, 13 and eight replicates were sampled for Col-0, Gifu and unplanted controls, respectively. DNA was isolated from those samples using the MP Biomedicals FastDNA Spin Kit for Soil.
\ No newline at end of file
-- 
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