diff --git a/README.md b/README.md index 973c08d6cd7273a46b8b0182b5b05dfc24731e1c..2adfb307741c2d6153c27e2674f8f057755c4b22 100644 --- a/README.md +++ b/README.md @@ -1,46 +1,3 @@ # ricinus_proteome_arc -Legacy data on Ricinus proteome from Nicole Linka and Thomas Wrobel - -## setting up this arc - -> using arcCommander v0.3.1 - -```bash -arc init -arc i create -i "Ricinus proteome" -mkdir _NicolesData; touch _NicolesData/.gitkeep -``` - -## add raw dataset as retrieved from Anja Stefanski via Sciebo (06.04.2022) - -### setup assay structure - -```bash -arc assay add -s "2012_ricinus_proteome_wrobel" -a "2012_proteome_data_bmfz_stefanski" -``` - -### run md5s on downloaded data - -```bash -md5 ~/Downloads/Daten\ Linka/*.raw > _NicolesData/raw_data_md5s.txt -``` - -### Add large data to gitignore for now... - -```bash -printf "\n*.raw" >> .gitignore -``` - -### add downloaded data to arc - -```bash -mv ~/Downloads/Daten\ Linka/Messliste_Wrobel.xlsx _NicolesData/ -mv ~/Downloads/Daten\ Linka/*.raw assays/2012_proteome_data_bmfz_stefanski/dataset -``` - -### sync arc with GitLab - -```bash -arc sync -m "add raw data from bmfz" -``` +Legacy data on Ricinus proteome from Nicole Linka and Thomas Wrobel diff --git a/_DominikNotes/README.md b/_DominikNotes/README.md new file mode 100644 index 0000000000000000000000000000000000000000..52d39b37e74ada8091b9368756ff1441edb7aa62 --- /dev/null +++ b/_DominikNotes/README.md @@ -0,0 +1,43 @@ + +# setting up this arc + +> using arcCommander v0.3.1 + +```bash +arc init +arc i create -i "Ricinus proteome" +mkdir _NicolesData; touch _NicolesData/.gitkeep +``` + +## add raw dataset as retrieved from Anja Stefanski via Sciebo (06.04.2022) + +### setup assay structure + +```bash +arc assay add -s "2012_ricinus_proteome_wrobel" -a "2012_proteome_data_bmfz_stefanski" +``` + +### run md5s on downloaded data + +```bash +md5 ~/Downloads/Daten\ Linka/*.raw > _NicolesData/raw_data_md5s.txt +``` + +### Add large data to gitignore for now... + +```bash +printf "\n*.raw" >> .gitignore +``` + +### add downloaded data to arc + +```bash +mv ~/Downloads/Daten\ Linka/Messliste_Wrobel.xlsx _NicolesData/ +mv ~/Downloads/Daten\ Linka/*.raw assays/2012_proteome_data_bmfz_stefanski/dataset +``` + +### sync arc with GitLab + +```bash +arc sync -m "add raw data from bmfz" +```