From 90f1f9d2bcbaae269d440db8fdf00259de4a2668 Mon Sep 17 00:00:00 2001
From: Dominik Brilhaus <dominik.brilhaus@hhu.de>
Date: Wed, 13 Apr 2022 15:15:18 +0200
Subject: [PATCH] add results data received from anja

---
 _DominikNotes/README.md                       |   1 +
 .../2022-04-13_proteome_discoverer/README.md  |   0
 .../dataset/.gitkeep                          |   0
 .../dataset/AllProteins.fasta                 |   3 +++
 .../dataset/quantification.xlsx               |   3 +++
 .../dataset/quantification_with_peptides.xlsx |   3 +++
 .../isa.assay.xlsx                            | Bin 0 -> 2684 bytes
 .../protocols/.gitkeep                        |   0
 isa.investigation.xlsx                        | Bin 3285 -> 3347 bytes
 9 files changed, 10 insertions(+)
 create mode 100644 assays/2022-04-13_proteome_discoverer/README.md
 create mode 100644 assays/2022-04-13_proteome_discoverer/dataset/.gitkeep
 create mode 100644 assays/2022-04-13_proteome_discoverer/dataset/AllProteins.fasta
 create mode 100644 assays/2022-04-13_proteome_discoverer/dataset/quantification.xlsx
 create mode 100644 assays/2022-04-13_proteome_discoverer/dataset/quantification_with_peptides.xlsx
 create mode 100644 assays/2022-04-13_proteome_discoverer/isa.assay.xlsx
 create mode 100644 assays/2022-04-13_proteome_discoverer/protocols/.gitkeep

diff --git a/_DominikNotes/README.md b/_DominikNotes/README.md
index 52d39b3..f8b19ce 100644
--- a/_DominikNotes/README.md
+++ b/_DominikNotes/README.md
@@ -15,6 +15,7 @@ mkdir _NicolesData; touch _NicolesData/.gitkeep
 
 ```bash
 arc assay add -s "2012_ricinus_proteome_wrobel" -a "2012_proteome_data_bmfz_stefanski"
+arc assay add -s "2012_ricinus_proteome_wrobel" -a "2022-04-13_proteome_discoverer"
 ```
 
 ### run md5s on downloaded data
diff --git a/assays/2022-04-13_proteome_discoverer/README.md b/assays/2022-04-13_proteome_discoverer/README.md
new file mode 100644
index 0000000..e69de29
diff --git a/assays/2022-04-13_proteome_discoverer/dataset/.gitkeep b/assays/2022-04-13_proteome_discoverer/dataset/.gitkeep
new file mode 100644
index 0000000..e69de29
diff --git a/assays/2022-04-13_proteome_discoverer/dataset/AllProteins.fasta b/assays/2022-04-13_proteome_discoverer/dataset/AllProteins.fasta
new file mode 100644
index 0000000..0b6fe8c
--- /dev/null
+++ b/assays/2022-04-13_proteome_discoverer/dataset/AllProteins.fasta
@@ -0,0 +1,3 @@
+version https://git-lfs.github.com/spec/v1
+oid sha256:d5c7585fd4015ec6b532ff1cfbc691ced1f1bdcc27dc34f4edea0a57344814cf
+size 1814424
diff --git a/assays/2022-04-13_proteome_discoverer/dataset/quantification.xlsx b/assays/2022-04-13_proteome_discoverer/dataset/quantification.xlsx
new file mode 100644
index 0000000..47967ba
--- /dev/null
+++ b/assays/2022-04-13_proteome_discoverer/dataset/quantification.xlsx
@@ -0,0 +1,3 @@
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diff --git a/assays/2022-04-13_proteome_discoverer/dataset/quantification_with_peptides.xlsx b/assays/2022-04-13_proteome_discoverer/dataset/quantification_with_peptides.xlsx
new file mode 100644
index 0000000..392112d
--- /dev/null
+++ b/assays/2022-04-13_proteome_discoverer/dataset/quantification_with_peptides.xlsx
@@ -0,0 +1,3 @@
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diff --git a/assays/2022-04-13_proteome_discoverer/isa.assay.xlsx b/assays/2022-04-13_proteome_discoverer/isa.assay.xlsx
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