diff --git a/assays/plant_phenotyping/dataset/LD_phenotyping_results.xlsx b/assays/plant_phenotyping/dataset/eam7_LD_phenotyping_results.xlsx similarity index 100% rename from assays/plant_phenotyping/dataset/LD_phenotyping_results.xlsx rename to assays/plant_phenotyping/dataset/eam7_LD_phenotyping_results.xlsx diff --git a/assays/plant_phenotyping/dataset/SD_phenotyping_results.xlsx b/assays/plant_phenotyping/dataset/eam7_SD_phenotyping_results.xlsx similarity index 100% rename from assays/plant_phenotyping/dataset/SD_phenotyping_results.xlsx rename to assays/plant_phenotyping/dataset/eam7_SD_phenotyping_results.xlsx diff --git a/assays/plant_phenotyping/isa.assay.xlsx b/assays/plant_phenotyping/isa.assay.xlsx index fa727243d7c5268d4899d89cbc8b28e655d0825a..b3584692cad382577fd8a4a238f406afa7be0bf8 100644 Binary files a/assays/plant_phenotyping/isa.assay.xlsx and b/assays/plant_phenotyping/isa.assay.xlsx differ diff --git a/assays/plant_phenotyping/protocols/score_flowering.md b/assays/plant_phenotyping/protocols/score_flowering.md index 4b7c93f67c095c87d8efda2690ad27bc49de1004..b875f52357d8cbc4ef325e313c19c515607a6cc0 100644 --- a/assays/plant_phenotyping/protocols/score_flowering.md +++ b/assays/plant_phenotyping/protocols/score_flowering.md @@ -2,9 +2,19 @@ - score in DAE (days after emergence) as the period between plant emergence from soil and reaching awn emergence on the main culm (Zadoks stage 49, Zadoks et al. (1974)) -**biparental_mapping:** + +**biparental_mapping_eam7:** - plants that did not flower after 130 DAE were scored as "not flowering" +**phenotyping_eam7_plants:** +- plants that did not flower after 125DAE were scored as "not flowering" + +**phenotyping_lwd1_mutantst:** +- plants that did not flower after 130 DAE were scored as "not flowering" + +**allelism_test:** +- plants that did not flower after 125DAE were scored as "not flowering" + **References:** Zadoks JC, Chang TT, Konzak CF. A decimal code for the growth stages of cereals. Weed Res. 1974:14(6):415–421. https://doi.org/10.1111/j.1365-3180.1974.tb01084.x \ No newline at end of file