diff --git a/assays/qRT-PCR/dataset/eam7_diurnal_gene_expression.xlsx b/assays/qRT-PCR/dataset/eam7_diurnal_gene_expression.xlsx new file mode 100644 index 0000000000000000000000000000000000000000..026c162e4a3a12735226c68f5926fb09cee9ef95 Binary files /dev/null and b/assays/qRT-PCR/dataset/eam7_diurnal_gene_expression.xlsx differ diff --git a/assays/qRT-PCR/protocols/qRT-PCR_primer.txt b/assays/qRT-PCR/protocols/qRT-PCR_primer.txt new file mode 100644 index 0000000000000000000000000000000000000000..fca17ab35b855aa842da3eca05b62d648a3aa790 --- /dev/null +++ b/assays/qRT-PCR/protocols/qRT-PCR_primer.txt @@ -0,0 +1,35 @@ +Target gene Primer Sequence 5’-3’ Fragment size (bp) +ACT (HORVU.MOREX.r3.5HG0457850) ACT_591F CGTGTTGGATTCTGGTGATG 208 + ACT_789R AGCCACATATGCGAGCTTCT +CO1 (HORVU.MOREX.r3.7HG0671540) CO1_2185F CTGCTGGGGCTAGTGCTTAC 251 + CO1_3454R CCTTGTTGCATAACGTGTGG +CO2 (HORVU.MOREX.r3.6HG0611630) CO2_564F AGTGGACTCTTGGCTCCTCA 158 + CO2_721R CATGCTGCTGTTCTTGCATT +ELF3 (HORVU.MOREX.r3.1HG0095050) ELF3_DL_3060_F3 TGCTGTCCAAGTGTTTGAGC 242 + Elf3_DL_4483_R3 CCTGGTTTCCTTCGGTGTTA +FT1 (HORVU.MOREX.r3.7HG0653910) FT1_1955F GGTAGACCCAGATGCTCCAA 120 + FT1_2183R TCGTAGCACATCACCTCCTG +GI (HORVU.MOREX.r3.3HG0238250) GI_6780F TCAGTTAGAGCTCCTGGAAGT 263 + GI_7289R GGTAGTTTGGGCTTTGGATG +LHY (HORVU.MOREX.r3.7HG0699010) HvLHY_672F CCTGGAATTGGAGATGGAGA 210 + HvLHY_882R TGAGCATGGCTTCTGATTTG +LUX1 (HORVU.MOREX.r3.3HG0328340) LUX_1077F AATTCAGTCCACGGATGCTC 222 + LUX_1298R CTTCACTTCAGCTCCCCTTG +LWD1 (HORVU.MOREX.r3.6HG0583670) LWD1_qPCR-114_F CAGCTCATAGCCCATGACAA 114 + LWD1_qPCR-114_R CTCCTTGTCCCGAAGATCAA +PHYB (HORVU.MOREX.r3.4HG0381880) HvPHYB-1151F CTTGCGCACCAACTATCAGA 232 + HvPHYB-1383R CTCCATGACACACCGTCAAC +PHYC (HORVU.MOREX.r3.5HG0511090) PHYC_0986F ACTACCCGGCAACTGACATC 142 + PHYC_1127R GAGCCACAGAGGCTGATAGG +Ppd-H1 (HORVU.MOREX.r3.2HG0107710) PPD1_2165F GATGGATTCAAAGGCAAGGA 172 + PPD1_2336R GAACAATTGGCTCCTCCAAA +PRR1 (HORVU.MOREX.r3.6HG0595250) HvPRR1_1056F GAGCATAGCATGGCACTTCA 237 + HvPRR1_1292R TGTCTTTCCTCGGAAATTGG +PRR59 (HORVU.MOREX.r3.4HG0350690) PRR59_2064_F GAAATTCCGCATGAAAAGGA 148 + PRR59_2212_R TTCCGCATCTTCTGTTGTTG +PRR73 (HORVU.MOREX.r3.5HG0498830) PRR73_441F GCGCCGTAGAGAATCAGAAC 222 + PRR73_662R CATGTCGGGTACAGTCATCG +PRR95 (HORVU.MOREX.r3.5HG0498830) PRR95_1467F CAGAACTCCAGTGTCGCAAA 251 + PRR95_1717R TGCTGTTGCCAGAGTTGTTC +VRN1 (HORVU.MOREX.r3.5HG0511210) HVBM5a_292F CTGAAGGCGAAGGTTGAGAC 203 + HVBM5a_494R TTCTCCTCCTGCAGTGACCT \ No newline at end of file