diff --git a/.gitattributes b/.gitattributes index 8835bbc7ba6a30c479bb5a92c2691ff61ae80953..323be595e7820e0ab4a8b1c84d70cbf1ebb27275 100644 --- a/.gitattributes +++ b/.gitattributes @@ -336,3 +336,8 @@ assays/rnaseq-GEO-export/dataset/GSE86380_SupplementalDataset1.xlsx filter=lfs d /assays/rna-seq/dataset/78-PSP-18-N_S43_L003_R1_001.fastq.gz filter=lfs diff=lfs merge=lfs -text /assays/rna-seq/dataset/63-PSP-18D_S32_L002_R2_001.fastq.gz filter=lfs diff=lfs merge=lfs -text /assays/rna-seq/dataset/79-PSP-18-N_S44_L003_R2_001.fastq.gz filter=lfs diff=lfs merge=lfs -text +_publications/Samuilov-2018-BOU/Data[[:space:]]Sheet[[:space:]]1.xlsx filter=lfs diff=lfs merge=lfs -text +_publications/Samuilov-2018-BOU/Image[[:space:]]1.pdf filter=lfs diff=lfs merge=lfs -text +_publications/Samuilov-2018-BOU/fpls-09-01709.pdf filter=lfs diff=lfs merge=lfs -text +_publications/Samuilov-2018-PSP/Data[[:space:]]Sheet[[:space:]]1.xlsx filter=lfs diff=lfs merge=lfs -text +_publications/Samuilov-2018-PSP/fpls-09-01830.pdf filter=lfs diff=lfs merge=lfs -text diff --git a/README.md b/README.md index c9f0d15a39cfa4a825f9e3b57bdb8badea0d7111..a8a71501f8bd197880271ed94256eb451a9ce3af 100644 --- a/README.md +++ b/README.md @@ -1,15 +1,44 @@ -# The Photorespiratory BOU Gene Mutation Alters Sulfur Assimilation and Its Crosstalk With Carbon and Nitrogen Metabolism in *Arabidopsis thaliana* +# Interaction of sulfur and nitrogen metabolism: significance of different serine sources for cysteine biosynthesis -This ARC is based on the following publication +This ARC contains data of the following publications -## Original publication +- [Samuilov-2018-BOU](#samuilov-2018-bou) + - [Original publication](#original-publication) + - [License (of publication)](#license-of-publication) + - [Data availability](#data-availability) +- [Samuilov-2018-PSP](#samuilov-2018-psp) + - [Original publication](#original-publication-1) + - [License (of publication)](#license-of-publication-1) + - [Data availability](#data-availability-1) + +## [Samuilov-2018-BOU](_publications/Samuilov-2018-BOU) + +Source: publication and supplementary data downloaded from https://doi.org/10.3389/fpls.2018.01709 + +### Original publication Samuilov S, Brilhaus D, Rademacher N, Flachbart S, Arab L, Alfarraj S, Kuhnert F, Kopriva S, Weber APM, Mettler-Altmann T and Rennenberg H (2018) The Photorespiratory BOU Gene Mutation Alters Sulfur Assimilation and Its Crosstalk With Carbon and Nitrogen Metabolism in Arabidopsis thaliana. Front. Plant Sci. 9:1709. doi: [10.3389/fpls.2018.01709](https://doi.org/10.3389/fpls.2018.01709) -## License (of publication) +### License (of publication) Copyright © 2018 Samuilov, Brilhaus, Rademacher, Flachbart, Arab, Alfarraj, Kuhnert, Kopriva, Weber, Mettler-Altmann and Rennenberg. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. -## Data availability +### Data availability + +Read data was also submitted to NCBI GEO under accession number [GSE86380](https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE86380) + +## [Samuilov-2018-PSP](_publications/Samuilov-2018-PSP) + +Source: publication and supplementary data downloaded from https://doi.org/10.3389/fpls.2018.01830 + +### Original publication + +Samuilov S, Rademacher N, Brilhaus D, Flachbart S, Arab L, Kopriva S, Weber APM, Mettler-Altmann T and Rennenberg H (2018) Knock-Down of the Phosphoserine Phosphatase Gene Effects Rather N- Than S-Metabolism in Arabidopsis thaliana. Front. Plant Sci. 9:1830. doi: [10.3389/fpls.2018.01830](https://doi.org/10.3389/fpls.2018.01830) + +### License (of publication) + +Copyright © 2018 Samuilov, Rademacher, Brilhaus, Flachbart, Arab, Kopriva, Weber, Mettler-Altmann and Rennenberg. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. + +### Data availability -Read data was also submitted to NCBI GEO under accession number [GSE86380](https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE86380). +The read data have been submitted to the NCBI GEO under accession number [GSE1122545](https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?&acc=GSE112254). diff --git a/_publication/README.md b/_publication/README.md deleted file mode 100644 index ac51b8e59af2631a629c0bfc79128c8c20784ce6..0000000000000000000000000000000000000000 --- a/_publication/README.md +++ /dev/null @@ -1,11 +0,0 @@ -# _publication - -Publication and supplementary data downloaded from https://doi.org/10.3389/fpls.2018.01709 - -## Original publication - -Samuilov S, Brilhaus D, Rademacher N, Flachbart S, Arab L, Alfarraj S, Kuhnert F, Kopriva S, Weber APM, Mettler-Altmann T and Rennenberg H (2018) The Photorespiratory BOU Gene Mutation Alters Sulfur Assimilation and Its Crosstalk With Carbon and Nitrogen Metabolism in Arabidopsis thaliana. Front. Plant Sci. 9:1709. doi: [10.3389/fpls.2018.01709](https://doi.org/10.3389/fpls.2018.01709) - -## License (of publication) - -Copyright © 2018 Samuilov, Brilhaus, Rademacher, Flachbart, Arab, Alfarraj, Kuhnert, Kopriva, Weber, Mettler-Altmann and Rennenberg. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. diff --git a/_publications/README.md b/_publications/README.md new file mode 100644 index 0000000000000000000000000000000000000000..0179326c757eb946c02a16a44074defacc8ce6fa --- /dev/null +++ b/_publications/README.md @@ -0,0 +1,25 @@ +# _publications + +## [Samuilov-2018-BOU](./Samuilov-2018-BOU) + +Source: publication and supplementary data downloaded from https://doi.org/10.3389/fpls.2018.01709 + +### Original publication + +Samuilov S, Brilhaus D, Rademacher N, Flachbart S, Arab L, Alfarraj S, Kuhnert F, Kopriva S, Weber APM, Mettler-Altmann T and Rennenberg H (2018) The Photorespiratory BOU Gene Mutation Alters Sulfur Assimilation and Its Crosstalk With Carbon and Nitrogen Metabolism in Arabidopsis thaliana. Front. Plant Sci. 9:1709. doi: [10.3389/fpls.2018.01709](https://doi.org/10.3389/fpls.2018.01709) + +### License (of publication) + +Copyright © 2018 Samuilov, Brilhaus, Rademacher, Flachbart, Arab, Alfarraj, Kuhnert, Kopriva, Weber, Mettler-Altmann and Rennenberg. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. + +## [Samuilov-2018-PSP](./Samuilov-2018-PSP) + +Source: publication and supplementary data downloaded from https://doi.org/10.3389/fpls.2018.01830 + +### Original publication + +Samuilov S, Rademacher N, Brilhaus D, Flachbart S, Arab L, Kopriva S, Weber APM, Mettler-Altmann T and Rennenberg H (2018) Knock-Down of the Phosphoserine Phosphatase Gene Effects Rather N- Than S-Metabolism in Arabidopsis thaliana. Front. Plant Sci. 9:1830. doi: [10.3389/fpls.2018.01830](https://doi.org/10.3389/fpls.2018.01830) + +### License (of publication) + +Copyright © 2018 Samuilov, Rademacher, Brilhaus, Flachbart, Arab, Kopriva, Weber, Mettler-Altmann and Rennenberg. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. 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