diff --git a/assays/CMML_16-0016_GCMS-MasshunterQuant/isa.assay.xlsx b/assays/CMML_16-0016_GCMS-MasshunterQuant/isa.assay.xlsx index 241da02e2cdfea71e6b4720d20c1b90d9a708b8c..0bd77a4215b9144cd1bc18196d996576a97cd871 100644 Binary files a/assays/CMML_16-0016_GCMS-MasshunterQuant/isa.assay.xlsx and b/assays/CMML_16-0016_GCMS-MasshunterQuant/isa.assay.xlsx differ diff --git a/assays/CMML_16-0016_GCMS/isa.assay.xlsx b/assays/CMML_16-0016_GCMS/isa.assay.xlsx index 8fdf60b567b48af640718ee5443338863f0a65bd..a6327926abaeda78f7fd73fd63145c920319c8c9 100644 Binary files a/assays/CMML_16-0016_GCMS/isa.assay.xlsx and b/assays/CMML_16-0016_GCMS/isa.assay.xlsx differ diff --git a/assays/CMML_16-0016_HPLC/isa.assay.xlsx b/assays/CMML_16-0016_HPLC/isa.assay.xlsx index 4ba44a89290e2733d9d2c2cc370fa4eea01fff58..5177a1db14ff934d581d8b46f144ec6eda8b3875 100644 Binary files a/assays/CMML_16-0016_HPLC/isa.assay.xlsx and b/assays/CMML_16-0016_HPLC/isa.assay.xlsx differ diff --git a/assays/CMML_16-0016_HPLC/protocols/.gitkeep b/assays/CMML_16-0016_HPLC/protocols/.gitkeep deleted file mode 100644 index e69de29bb2d1d6434b8b29ae775ad8c2e48c5391..0000000000000000000000000000000000000000 diff --git a/assays/CMML_16-0016_HPLC/protocols/160712_HPLC-DAD/161013_UHPL-DAD_SS.xlsx b/assays/CMML_16-0016_HPLC/protocols/160712_HPLC-DAD/161013_UHPL-DAD_SS.xlsx deleted file mode 100755 index 91a0a5b2f2b972f073478e4f20448bd981065cbe..0000000000000000000000000000000000000000 Binary files a/assays/CMML_16-0016_HPLC/protocols/160712_HPLC-DAD/161013_UHPL-DAD_SS.xlsx and /dev/null differ diff --git a/assays/CMML_16-0016_HPLC/protocols/160712_HPLC-DAD/HHU_HPLC-DAD_project_info.xlsx b/assays/CMML_16-0016_HPLC/protocols/160712_HPLC-DAD/HHU_HPLC-DAD_project_info.xlsx deleted file mode 100755 index 4b75f0d460bd8966c2ddcdfc75ecd0f6ea278356..0000000000000000000000000000000000000000 Binary files a/assays/CMML_16-0016_HPLC/protocols/160712_HPLC-DAD/HHU_HPLC-DAD_project_info.xlsx and /dev/null differ diff --git a/assays/rna-seq/protocols/rna-extraction.md b/assays/rna-seq/protocols/rna-extraction.md index efda017a3febecb3fd5193488da2003ea18b98f5..cb71bc8a43ff33710e3cea7a1aa164e40252c0da 100644 --- a/assays/rna-seq/protocols/rna-extraction.md +++ b/assays/rna-seq/protocols/rna-extraction.md @@ -1,3 +1,3 @@ # RNA Extraction -Whole rosettes were harvested and immediately frozen in liquid nitrogen. RNA was isolated from ground tissue using the RNeasyPlant Mini Kit (QIAGEN, Hilden, Germany). Residues of DNAwere removed with DNase (New England Biolabs, Ipswitch, MA,United States). RNA integrity, sequencing library, and fragment size were analyzed on a 2100 Bioanalyzer (Agilent Technologies,Santa Clara, CA, United States). +Whole rosettes were harvested and immediately frozen in liquid nitrogen. RNA was isolated from ground tissue using the RNeasyPlant Mini Kit (QIAGEN, Hilden, Germany). Residues of DNA were removed with DNase (New England Biolabs, Ipswitch, MA,United States). RNA integrity, sequencing library, and fragment size were analyzed on a 2100 Bioanalyzer (Agilent Technologies,Santa Clara, CA, United States). diff --git a/studies/bou-2_DayNight/isa.study.xlsx b/studies/bou-2_DayNight/isa.study.xlsx index ff452e96cb58687c1bf7f5014370693cf770d0ca..de494aa67232795a21e183dfd08a3c4f3bcdfbde 100644 Binary files a/studies/bou-2_DayNight/isa.study.xlsx and b/studies/bou-2_DayNight/isa.study.xlsx differ