diff --git a/_publication/fpls-14-1182105-g002.jpg b/_publication/fpls-14-1182105-g002.jpg deleted file mode 100644 index 1e4ac4ed122d7460f191fe9474ef3994d090637c..0000000000000000000000000000000000000000 Binary files a/_publication/fpls-14-1182105-g002.jpg and /dev/null differ diff --git a/_publication/fpls-14-1182105-g003.jpg b/_publication/fpls-14-1182105-g003.jpg deleted file mode 100644 index 750b1d9ae3fa6a1472444a4d6bcac97dd9b9aa6b..0000000000000000000000000000000000000000 Binary files a/_publication/fpls-14-1182105-g003.jpg and /dev/null differ diff --git a/_publication/fpls-14-1182105-g004.jpg b/_publication/fpls-14-1182105-g004.jpg deleted file mode 100644 index efbaedb638ebdee2ee8966cf8588c80474c241ce..0000000000000000000000000000000000000000 Binary files a/_publication/fpls-14-1182105-g004.jpg and /dev/null differ diff --git a/_publication/fpls-14-1182105-g005.jpg b/_publication/fpls-14-1182105-g005.jpg deleted file mode 100644 index 79a4a3d73a65c0e085fa9253b1421427a36a80d7..0000000000000000000000000000000000000000 Binary files a/_publication/fpls-14-1182105-g005.jpg and /dev/null differ diff --git a/_publication/fpls-14-1182105-g006.jpg b/_publication/fpls-14-1182105-g006.jpg deleted file mode 100644 index 3540cdec1ddb9a0405c8a4b5a6f2fc27eddb006a..0000000000000000000000000000000000000000 Binary files a/_publication/fpls-14-1182105-g006.jpg and /dev/null differ diff --git a/_publication/fpls-14-1182105-t001.jpg b/_publication/fpls-14-1182105-t001.jpg deleted file mode 100644 index 33c658916e8a40d82d339a8b8a7fd179ff860b48..0000000000000000000000000000000000000000 Binary files a/_publication/fpls-14-1182105-t001.jpg and /dev/null differ diff --git a/assays/2_2-FAME-analysis/README.md b/assays/2_2-FAME-analysis/README.md index e69de29bb2d1d6434b8b29ae775ad8c2e48c5391..14ea87c6cee16b1e6d6f1ae4fe746ef0b8f51aaa 100644 --- a/assays/2_2-FAME-analysis/README.md +++ b/assays/2_2-FAME-analysis/README.md @@ -0,0 +1,8 @@ + +## FAME-analysis + + + +Figure 2 + +Storage oil mobilization in castor bean endosperm. (A) Relative fresh weight of the endosperm in dry seeds (-1d), imbibed seeds (0d) and 1- to 7-day old dark-grown castor bean seedlings (1-7d) as percentage of fresh weight of the whole plant. Data represent arithmetic means ± SD of 3 biological replicates. (B) Relative ricinoleic acid content of the endosperm from seeds and seedlings. Samples were normalized to the average fresh weight of on endosperm and expressed as percentages of their initial quantities determined in dry seeds (-1d). Error bars show standard deviations of the means of at least three biological replicates. \ No newline at end of file diff --git a/assays/2_2-FAME-analysis/dataset/fpls-14-1182105-g002.jpg b/assays/2_2-FAME-analysis/dataset/fpls-14-1182105-g002.jpg new file mode 100644 index 0000000000000000000000000000000000000000..c8109c77d7a4d9fbac824772368bbf92b51b992f --- /dev/null +++ b/assays/2_2-FAME-analysis/dataset/fpls-14-1182105-g002.jpg @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:f50011a83fed3d1edbe2267c3dfae7984eda684dd871f3f57c89d1245ef3e158 +size 45005 diff --git a/assays/2_3-OrganellesFromEndosperm/README.md b/assays/2_3-OrganellesFromEndosperm/README.md index e69de29bb2d1d6434b8b29ae775ad8c2e48c5391..711acb0df653139365e32d692c8c3b1c01ee8c5e 100644 --- a/assays/2_3-OrganellesFromEndosperm/README.md +++ b/assays/2_3-OrganellesFromEndosperm/README.md @@ -0,0 +1,3 @@ + + + diff --git a/assays/2_3-OrganellesFromEndosperm/dataset/.gitkeep b/assays/2_3-OrganellesFromEndosperm/dataset/.gitkeep deleted file mode 100644 index e69de29bb2d1d6434b8b29ae775ad8c2e48c5391..0000000000000000000000000000000000000000 diff --git a/assays/2_3-OrganellesFromEndosperm/dataset/fpls-14-1182105-g003.jpg b/assays/2_3-OrganellesFromEndosperm/dataset/fpls-14-1182105-g003.jpg new file mode 100644 index 0000000000000000000000000000000000000000..da9a99e7836d4e9e80f26eef573e2b5a70f682db --- /dev/null +++ b/assays/2_3-OrganellesFromEndosperm/dataset/fpls-14-1182105-g003.jpg @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:742249cb95c84184d978a029a973ffacb6e2300009de3258fcf209969ddb6d81 +size 225851 diff --git a/assays/2_4-EnzymeActivityOrganellarMarkers/dataset/.gitkeep b/assays/2_4-EnzymeActivityOrganellarMarkers/dataset/.gitkeep deleted file mode 100644 index e69de29bb2d1d6434b8b29ae775ad8c2e48c5391..0000000000000000000000000000000000000000 diff --git a/assays/2_4-EnzymeActivityOrganellarMarkers/dataset/fpls-14-1182105-t001.jpg b/assays/2_4-EnzymeActivityOrganellarMarkers/dataset/fpls-14-1182105-t001.jpg new file mode 100644 index 0000000000000000000000000000000000000000..337880186824ff9a07af46bbc2b5c88b3d8bf3fe --- /dev/null +++ b/assays/2_4-EnzymeActivityOrganellarMarkers/dataset/fpls-14-1182105-t001.jpg @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:ee0112297a5184cd9b4da9124a63e1972e3b25bbb971167434e3f80acaa91bb2 +size 67347 diff --git a/assays/2_6-SDS-PAGE-Immunoblotting/dataset/.gitkeep b/assays/2_6-SDS-PAGE-Immunoblotting/dataset/.gitkeep deleted file mode 100644 index e69de29bb2d1d6434b8b29ae775ad8c2e48c5391..0000000000000000000000000000000000000000 diff --git a/assays/2_6-SDS-PAGE-Immunoblotting/dataset/fpls-14-1182105-g004.jpg b/assays/2_6-SDS-PAGE-Immunoblotting/dataset/fpls-14-1182105-g004.jpg new file mode 100644 index 0000000000000000000000000000000000000000..9c2f95ebde47f3ff5aaa9dc75ab969e76e8896ba --- /dev/null +++ b/assays/2_6-SDS-PAGE-Immunoblotting/dataset/fpls-14-1182105-g004.jpg @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:116562d41cd9056524df279fd75c18e985d7f4d4608d9967185c57608fbacb7d +size 85064 diff --git a/assays/2_9-StatisticalAnalysis-ProteomeDeconvolution/dataset/fpls-14-1182105-g005.jpg b/assays/2_9-StatisticalAnalysis-ProteomeDeconvolution/dataset/fpls-14-1182105-g005.jpg new file mode 100644 index 0000000000000000000000000000000000000000..cd36a19e2d97ef903e5fcb4d691e8572b239daf8 --- /dev/null +++ b/assays/2_9-StatisticalAnalysis-ProteomeDeconvolution/dataset/fpls-14-1182105-g005.jpg @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:ef8d958b6406263653bb6a6dd805aee770a527425db7df0a981ffb2ecd3c74eb +size 134166 diff --git a/assays/2_9-StatisticalAnalysis-ProteomeDeconvolution/dataset/fpls-14-1182105-g006.jpg b/assays/2_9-StatisticalAnalysis-ProteomeDeconvolution/dataset/fpls-14-1182105-g006.jpg new file mode 100644 index 0000000000000000000000000000000000000000..3b6e967e1e7e3fa609cdc42e9ff16623dd541c37 --- /dev/null +++ b/assays/2_9-StatisticalAnalysis-ProteomeDeconvolution/dataset/fpls-14-1182105-g006.jpg @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:ea14cde2c2c60e516a1b094e0d460c50684f168f80ec435dfb7cd6c05636898c +size 227611 diff --git a/studies/Ricinus-communis-seeds/README.md b/studies/Ricinus-communis-seeds/README.md index e69de29bb2d1d6434b8b29ae775ad8c2e48c5391..0eb3c8dda7335fbc2a04b9a616acddfeab145866 100644 --- a/studies/Ricinus-communis-seeds/README.md +++ b/studies/Ricinus-communis-seeds/README.md @@ -0,0 +1,8 @@ + +## Ricinus-communis-seeds + + + +Figure 1 + +Endosperm morphology in seeds and germinating seedling of R. communis. Photographs were taken from the whole plant (upper panel) and two cotyledons embedded in the endosperm (lower panel) from mature seeds (dry), 24h-imbibed seeds (imb) and from 1- to 7-day old dark-grown castor bean seedlings (1-7d). Scale bar = 1 cm. \ No newline at end of file diff --git a/_publication/fpls-14-1182105-g001.jpg b/studies/Ricinus-communis-seeds/resources/fpls-14-1182105-g001.jpg similarity index 100% rename from _publication/fpls-14-1182105-g001.jpg rename to studies/Ricinus-communis-seeds/resources/fpls-14-1182105-g001.jpg