From 69c822da7ffdd3b11033dc2cbb4f35dfd0da0514 Mon Sep 17 00:00:00 2001 From: alisandra <alisandra.denton@hhu.de> Date: Mon, 22 Aug 2022 09:13:20 +0200 Subject: [PATCH] finally tested hd5 fix for kallisto --- workflows/docker/Dockerfile | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/workflows/docker/Dockerfile b/workflows/docker/Dockerfile index 2cb3132..fc7805f 100644 --- a/workflows/docker/Dockerfile +++ b/workflows/docker/Dockerfile @@ -110,7 +110,7 @@ RUN git clone https://github.com/pachterlab/kallisto.git RUN mkdir kallisto/build WORKDIR /home/ZIM-gast/repos/kallisto/build ENV LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/usr/lib/x86_64-linux-gnu/hdf5/serial/lib -RUN cmake -DCMAKE_INSTALL_PREFIX=/home/ZIM-gast/ .. +RUN cmake -DCMAKE_INSTALL_PREFIX=/home/ZIM-gast/ -DUSE_HDF5=ON .. RUN make RUN make install # python -- GitLab