KeyValue
CreIdentifierCre01.g030600
GeneNameMAPKKK4
MapManminor CHO metabolism.callose;protein.postranslational modification
Annotation
FDR(acetate-depleting 25vs35)0.6921
FDR(acetate-depleting 25vs40)0.5410
FDR(constant-acetate 25vs35)0.1183
FDR(constant-acetate 25vs40)0.0297*
FDR(medium)0.9643
FDR(temperature)0.5353
FDR(constant-acetate 25 vs acetate-depleting 25)0.3742

First figure, mean normalized transcript read counts are visualized with error bars representing standard deviation of triplicates.

Second figure, heatmap, the color bar represents the mean normalized read count values. The dashed grey box indicates time points that were imputed from additional samples harvested from the same experiment of the constant-acetate 25°C (0 h, 0.5 h, 26 h, and 48 h, respectively). The cell physiologies were steady under the constant-acetate 25°C. See RNA-seq methods for details.

Third figure, the transcriptional change of the transcript under each condition is presented as log2 (fold change, FC) regarding the pre-heat time point. Log2FC were determined on the mean normalized transcript abundance.

Black vertical lines in the first and third figures indicate the start of heat treatments under 35°C or 40°C or the equivalent time point at 25°C. The first data point before the black line is from the pre-heat time point.