KeyValue
CreIdentifierCre17.g711050
GeneName
MapManRNA.regulation of transcription;S-assimilation.AKN
Annotation
FDR(acetate-depleting 25vs35)0.1713
FDR(acetate-depleting 25vs40)0.4525
FDR(constant-acetate 25vs35)0.2217
FDR(constant-acetate 25vs40)0.3793
FDR(medium)0.9777
FDR(temperature)0.0597
FDR(constant-acetate 25 vs acetate-depleting 25)0.4036

First figure, mean normalized transcript read counts are visualized with error bars representing standard deviation of triplicates.

Second figure, heatmap, the color bar represents the mean normalized read count values. The dashed grey box indicates time points that were imputed from additional samples harvested from the same experiment of the constant-acetate 25°C (0 h, 0.5 h, 26 h, and 48 h, respectively). The cell physiologies were steady under the constant-acetate 25°C. See RNA-seq methods for details.

Third figure, the transcriptional change of the transcript under each condition is presented as log2 (fold change, FC) regarding the pre-heat time point. Log2FC were determined on the mean normalized transcript abundance.

Black vertical lines in the first and third figures indicate the start of heat treatments under 35°C or 40°C or the equivalent time point at 25°C. The first data point before the black line is from the pre-heat time point.