KeyValue
CreIdentifierCre03.g187450
GeneNameRPI1
MapManOPP.non-reductive PP.ribose 5-phosphate isomerase;PS.calvin cycle.Rib5P Isomerase
AnnotationCarbonFixation.Calvin
FDR(acetate-depleting 25vs35)0.0880
FDR(acetate-depleting 25vs40)0.0000**
FDR(constant-acetate 25vs35)0.0000**
FDR(constant-acetate 25vs40)0.0000**
FDR(medium)0.5084
FDR(temperature)0.0002**
FDR(interaction)0.7901
FDR(constant-acetate 25 vs acetate-depleting 25)0.0000**

First figure, normalized counts are visualized with error bars representing standard deviation of triplicates.
Second figure, heatmap, the color bar represents the mean normalized read count values. The dashed grey box indicates timepoints that were imputed from additional samples harvested from the same experiment with constant acetate supply and constant 25 °C (0 h, 0.5 h, 26 h, and 48 h respectively). The cell physiologies were constant under constant-acetate 25 °C.
Third figure, every normed count is given as log2 (fold change, FC) regarding the preheat time point. Log2FC were determined on mean transcript abundances.