KeyValue
CreIdentifierCre17.g705700
GeneNameGGK1
MapManamino acid metabolism.synthesis.glutamate family.proline.delta 1-pyrroline-5-carboxylate synthetase;amino acid metabolism.synthesis.glutamate family.proline
Annotation
FDR(acetate-depleting 25vs35)0.2398
FDR(acetate-depleting 25vs40)0.5828
FDR(constant-acetate 25vs35)0.0219*
FDR(constant-acetate 25vs40)0.4776
FDR(medium)0.9148
FDR(temperature)0.0525
FDR(interaction)0.9170
FDR(constant-acetate 25 vs acetate-depleting 25)0.5049

First figure, normalized counts are visualized with error bars representing standard deviation of triplicates.
Second figure, heatmap, the color bar represents the mean normalized read count values. The dashed grey box indicates timepoints that were imputed from additional samples harvested from the same experiment with constant acetate supply and constant 25 °C (0 h, 0.5 h, 26 h, and 48 h respectively). The cell physiologies were constant under constant-acetate 25 °C.
Third figure, every normed count is given as log2 (fold change, FC) regarding the preheat time point. Log2FC were determined on mean transcript abundances.