KeyValue
CreIdentifierCre08.g372950
GeneNameIDS1
MapMansecondary metabolism.isoprenoids.non-mevalonate pathway.HDR
AnnotationPigmentBiosynthesis.Carotenoid
FDR(acetate-depleting 25vs35)0.8858
FDR(acetate-depleting 25vs40)0.1082
FDR(constant-acetate 25vs35)0.3314
FDR(constant-acetate 25vs40)0.0092**
FDR(medium)0.6715
FDR(temperature)0.0000**
FDR(interaction)0.5170
FDR(constant-acetate 25 vs acetate-depleting 25)0.0002**

First figure, normalized counts are visualized with error bars representing standard deviation of triplicates.
Second figure, heatmap, the color bar represents the mean normalized read count values. The dashed grey box indicates timepoints that were imputed from additional samples harvested from the same experiment with constant acetate supply and constant 25 °C (0 h, 0.5 h, 26 h, and 48 h respectively). The cell physiologies were constant under constant-acetate 25 °C.
Third figure, every normed count is given as log2 (fold change, FC) regarding the preheat time point. Log2FC were determined on mean transcript abundances.