KeyValue
CreIdentifierCre12.g511700
GeneName
MapMansecondary metabolism.isoprenoids.mevalonate pathway.geranyl diphosphate synthase;secondary metabolism.isoprenoids.non-mevalonate pathway.geranylgeranyl pyrophosphate synthase
Annotation
FDR(acetate-depleting 25vs35)0.3669
FDR(acetate-depleting 25vs40)0.0004**
FDR(constant-acetate 25vs35)0.1314
FDR(constant-acetate 25vs40)0.0000**
FDR(medium)0.6708
FDR(temperature)0.0012**
FDR(interaction)0.7513
FDR(constant-acetate 25 vs acetate-depleting 25)0.0510

First figure, normalized counts are visualized with error bars representing standard deviation of triplicates.
Second figure, heatmap, the color bar represents the mean normalized read count values. The dashed grey box indicates timepoints that were imputed from additional samples harvested from the same experiment with constant acetate supply and constant 25 °C (0 h, 0.5 h, 26 h, and 48 h respectively). The cell physiologies were constant under constant-acetate 25 °C.
Third figure, every normed count is given as log2 (fold change, FC) regarding the preheat time point. Log2FC were determined on mean transcript abundances.