KeyValue
CreIdentifierCre13.g592200
GeneNameGSN1
MapManN-metabolism.ammonia metabolism.glutamate synthase.NADH dependent;N-metabolism.ammonia metabolism.glutamate synthase
AnnotationNitrogenAssimilation.NH4 fixation
FDR(acetate-depleting 25vs35)0.6323
FDR(acetate-depleting 25vs40)0.1209
FDR(constant-acetate 25vs35)0.4303
FDR(constant-acetate 25vs40)0.2226
FDR(medium)0.8647
FDR(temperature)0.0334*
FDR(interaction)0.9119
FDR(constant-acetate 25 vs acetate-depleting 25)0.5474

First figure, normalized counts are visualized with error bars representing standard deviation of triplicates.
Second figure, heatmap, the color bar represents the mean normalized read count values. The dashed grey box indicates timepoints that were imputed from additional samples harvested from the same experiment with constant acetate supply and constant 25 °C (0 h, 0.5 h, 26 h, and 48 h respectively). The cell physiologies were constant under constant-acetate 25 °C.
Third figure, every normed count is given as log2 (fold change, FC) regarding the preheat time point. Log2FC were determined on mean transcript abundances.