KeyValue
CreIdentifierCre16.g673250
GeneNameNRR1
MapMandevelopment.unspecified;RNA.regulation of transcription.squamosa promoter binding protein family (SBP)
AnnotationNitrogenAssimilation.Known regulators;TFs.SBP
FDR(acetate-depleting 25vs35)0.1209
FDR(acetate-depleting 25vs40)0.0000**
FDR(constant-acetate 25vs35)0.3290
FDR(constant-acetate 25vs40)0.0054**
FDR(medium)0.8974
FDR(temperature)0.0777
FDR(interaction)0.9190
FDR(constant-acetate 25 vs acetate-depleting 25)0.4908

First figure, normalized counts are visualized with error bars representing standard deviation of triplicates.
Second figure, heatmap, the color bar represents the mean normalized read count values. The dashed grey box indicates timepoints that were imputed from additional samples harvested from the same experiment with constant acetate supply and constant 25 °C (0 h, 0.5 h, 26 h, and 48 h respectively). The cell physiologies were constant under constant-acetate 25 °C.
Third figure, every normed count is given as log2 (fold change, FC) regarding the preheat time point. Log2FC were determined on mean transcript abundances.