KeyValue
CreIdentifierCre10.g433350
GeneName
MapMandevelopment.squamosa promoter binding like (SPL);RNA.regulation of transcription.squamosa promoter binding protein family (SBP)
AnnotationTFs.SBP
FDR(acetate-depleting 25vs35)0.0969
FDR(acetate-depleting 25vs40)0.0000**
FDR(constant-acetate 25vs35)0.9924
FDR(constant-acetate 25vs40)0.0000**
FDR(medium)0.4854
FDR(temperature)0.0000**
FDR(interaction)0.4604
FDR(constant-acetate 25 vs acetate-depleting 25)0.2347

First figure, normalized counts are visualized with error bars representing standard deviation of triplicates.
Second figure, heatmap, the color bar represents the mean normalized read count values. The dashed grey box indicates timepoints that were imputed from additional samples harvested from the same experiment with constant acetate supply and constant 25 °C (0 h, 0.5 h, 26 h, and 48 h respectively). The cell physiologies were constant under constant-acetate 25 °C.
Third figure, every normed count is given as log2 (fold change, FC) regarding the preheat time point. Log2FC were determined on mean transcript abundances.