KeyValue
CreIdentifierCre12.g548400
GeneNameLHCBM2
MapManPS.lightreaction.photosystem II.LHC-II
AnnotationPSLightReaction.LHCII
FDR(acetate-depleting 25vs35)0.0282*
FDR(acetate-depleting 25vs40)0.3192
FDR(constant-acetate 25vs35)0.4548
FDR(constant-acetate 25vs40)0.6538
FDR(medium)0.8326
FDR(temperature)0.0893
FDR(interaction)0.9764
FDR(constant-acetate 25 vs acetate-depleting 25)0.0000**

First figure, normalized counts are visualized with error bars representing standard deviation of triplicates.
Second figure, heatmap, the color bar represents the mean normalized read count values. The dashed grey box indicates timepoints that were imputed from additional samples harvested from the same experiment with constant acetate supply and constant 25 °C (0 h, 0.5 h, 26 h, and 48 h respectively). The cell physiologies were constant under constant-acetate 25 °C.
Third figure, every normed count is given as log2 (fold change, FC) regarding the preheat time point. Log2FC were determined on mean transcript abundances.