KeyValue
CreIdentifierCre08.g365692
GeneNameSIR4
MapManS-assimilation.sulfite redox
Annotation
FDR(acetate-depleting 25vs35)0.0423*
FDR(acetate-depleting 25vs40)0.9849
FDR(constant-acetate 25vs35)0.0153*
FDR(constant-acetate 25vs40)0.2204
FDR(medium)0.8432
FDR(temperature)0.2096
FDR(interaction)0.8118
FDR(constant-acetate 25 vs acetate-depleting 25)0.0999

First figure, normalized counts are visualized with error bars representing standard deviation of triplicates.
Second figure, heatmap, the color bar represents the mean normalized read count values. The dashed grey box indicates timepoints that were imputed from additional samples harvested from the same experiment with constant acetate supply and constant 25 °C (0 h, 0.5 h, 26 h, and 48 h respectively). The cell physiologies were constant under constant-acetate 25 °C.
Third figure, every normed count is given as log2 (fold change, FC) regarding the preheat time point. Log2FC were determined on mean transcript abundances.