KeyValue
CreIdentifierCre06.g278350
GeneNameAGD1
MapManamino acid metabolism.synthesis.aromatic aa.tyrosine.prephenate dehydrogenase;amino acid metabolism.synthesis.aromatic aa.tyrosine.arogenate dehydrogenase / prephenate dehydrogenase
Annotation
FDR(acetate-depleting 25vs35)0.0361*
FDR(acetate-depleting 25vs40)0.4710
FDR(constant-acetate 25vs35)0.0037**
FDR(constant-acetate 25vs40)0.4084
FDR(medium)0.8588
FDR(temperature)0.0533
FDR(interaction)0.8107
FDR(constant-acetate 25 vs acetate-depleting 25)0.0010**

First figure, mean normalized transcript read counts are visualized with error bars representing standard deviation of triplicates.
Second figure, heatmap, the color bar represents the mean normalized read count //values. The dashed grey box indicates timepoints that were imputed from additional samples harvested from the same experiment with constant acetate supply and constant 25 °C (0 h, 0.5 h, 26 h, and 48 h //respectively). The cell physiologies were constant under constant-acetate 25 °C.
Third figure, the transcriptional change of the transcript under each condition is presented as log2 (fold change, FC) regarding the pre-heat time point. Log2FC were determined on the mean normalized transcript abundance.