From f5d93b97d92bed4c4e474e776b504ab08aeb1fa0 Mon Sep 17 00:00:00 2001
From: Senthil-Kumar Devan <devan@hhu.de>
Date: Thu, 9 Jan 2025 13:52:08 +0000
Subject: [PATCH] assays S4 changed to S5

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 ...S PAGE of purified H-Rrm4-MLLE3, H-Pab1-MLLE.pdf | Bin
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 ...lusion chromotography of H-Pab1-MLLE (P4794).pdf | Bin
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 ...98,0157,0168,0203,0211_bait Pab1-MLLE_super2.png | Bin
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 ...98,0157,0168,0203,0211_bait Pab1-MLLE_super2.png | Bin
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 rename assays/{S4_A1_Protein structure prediction => S5_A1_Protein structure prediction}/README.md (100%)
 rename assays/{S4_A1_Protein structure prediction => S5_A1_Protein structure prediction}/dataset/.gitkeep (100%)
 rename assays/{S4_A1_Protein structure prediction => S5_A1_Protein structure prediction}/dataset/Alphafold predicted structural model of H-Pab1-MLLE (P4794).pdb (100%)
 rename assays/{S4_A1_Protein structure prediction => S5_A1_Protein structure prediction}/isa.assay.xlsx (100%)
 rename assays/{S4_A1_Protein structure prediction => S5_A1_Protein structure prediction}/protocols/.gitkeep (100%)
 rename assays/{S4_A2_Purification of H-Pab1-MLLE for structural studies => S5_A2_Purification of H-Pab1-MLLE for structural studies}/README.md (100%)
 rename assays/{S4_A2_Purification of H-Pab1-MLLE for structural studies => S5_A2_Purification of H-Pab1-MLLE for structural studies}/dataset/.gitkeep (100%)
 rename assays/{S4_A2_Purification of H-Pab1-MLLE for structural studies => S5_A2_Purification of H-Pab1-MLLE for structural studies}/dataset/Fig S1A, S3A SDS PAGE of purified H-Rrm4-MLLE3, H-Pab1-MLLE.pdf (100%)
 rename assays/{S4_A2_Purification of H-Pab1-MLLE for structural studies => S5_A2_Purification of H-Pab1-MLLE for structural studies}/dataset/Fig S1A, S3A SDS PAGE of purified H-Rrm4-MLLE3, H-Pab1-MLLE.png (100%)
 rename assays/{S4_A2_Purification of H-Pab1-MLLE for structural studies => S5_A2_Purification of H-Pab1-MLLE for structural studies}/dataset/Fig S1A, S3A SDS PAGE of purified H-Rrm4-MLLE3, H-Pab1-MLLE.pptx (100%)
 rename assays/{S4_A2_Purification of H-Pab1-MLLE for structural studies => S5_A2_Purification of H-Pab1-MLLE for structural studies}/isa.assay.xlsx (100%)
 rename assays/{S4_A2_Purification of H-Pab1-MLLE for structural studies => S5_A2_Purification of H-Pab1-MLLE for structural studies}/protocols/.gitkeep (100%)
 rename assays/{S4_A3_Size exclusion chromotography of H-Pab1-MLLE => S5_A3_Size exclusion chromotography of H-Pab1-MLLE}/README.md (100%)
 rename assays/{S4_A3_Size exclusion chromotography of H-Pab1-MLLE => S5_A3_Size exclusion chromotography of H-Pab1-MLLE}/dataset/.gitkeep (100%)
 rename assays/{S4_A3_Size exclusion chromotography of H-Pab1-MLLE => S5_A3_Size exclusion chromotography of H-Pab1-MLLE}/dataset/Size exclusion chromotography of H-Pab1-MLLE (P4794).pdf (100%)
 rename assays/{S4_A3_Size exclusion chromotography of H-Pab1-MLLE => S5_A3_Size exclusion chromotography of H-Pab1-MLLE}/dataset/Size exclusion chromotography of H-Pab1-MLLE (P4794).xlsx (100%)
 rename assays/{S4_A3_Size exclusion chromotography of H-Pab1-MLLE => S5_A3_Size exclusion chromotography of H-Pab1-MLLE}/isa.assay.xlsx (100%)
 rename assays/{S4_A3_Size exclusion chromotography of H-Pab1-MLLE => S5_A3_Size exclusion chromotography of H-Pab1-MLLE}/protocols/.gitkeep (100%)
 rename assays/{S4_A4_Isothermal Titration calorimetry-ITC with H-Pab1-MLLE => S5_A4_Isothermal Titration calorimetry-ITC with H-Pab1-MLLE}/README.md (100%)
 rename assays/{S4_A4_Isothermal Titration calorimetry-ITC with H-Pab1-MLLE => S5_A4_Isothermal Titration calorimetry-ITC with H-Pab1-MLLE}/dataset/.gitkeep (100%)
 rename assays/{S4_A4_Isothermal Titration calorimetry-ITC with H-Pab1-MLLE => S5_A4_Isothermal Titration calorimetry-ITC with H-Pab1-MLLE}/dataset/ITC files/ITCbuffer_PAM2-1200uM.itc (100%)
 rename assays/{S4_A4_Isothermal Titration calorimetry-ITC with H-Pab1-MLLE => S5_A4_Isothermal Titration calorimetry-ITC with H-Pab1-MLLE}/dataset/ITC files/P4794-100uM_PAM2-1200uM_1.itc (100%)
 rename assays/{S4_A4_Isothermal Titration calorimetry-ITC with H-Pab1-MLLE => S5_A4_Isothermal Titration calorimetry-ITC with H-Pab1-MLLE}/dataset/ITC files/P4794-100uM_PAM2-1200uM_2.itc (100%)
 rename assays/{S4_A4_Isothermal Titration calorimetry-ITC with H-Pab1-MLLE => S5_A4_Isothermal Titration calorimetry-ITC with H-Pab1-MLLE}/dataset/OPJ files/P4794-100uM_PAM2-1200uM_1-Ref_1.itc.OPJ (100%)
 rename assays/{S4_A4_Isothermal Titration calorimetry-ITC with H-Pab1-MLLE => S5_A4_Isothermal Titration calorimetry-ITC with H-Pab1-MLLE}/dataset/OPJ files/P4794-100uM_PAM2-1200uM_2-Ref.OPJ (100%)
 rename assays/{S4_A4_Isothermal Titration calorimetry-ITC with H-Pab1-MLLE => S5_A4_Isothermal Titration calorimetry-ITC with H-Pab1-MLLE}/dataset/PDF files/P4794-100uM_PAM2-1200uM_1-Ref.pdf (100%)
 rename assays/{S4_A4_Isothermal Titration calorimetry-ITC with H-Pab1-MLLE => S5_A4_Isothermal Titration calorimetry-ITC with H-Pab1-MLLE}/dataset/PDF files/P4794-100uM_PAM2-1200uM_2-Ref.pdf (100%)
 rename assays/{S4_A4_Isothermal Titration calorimetry-ITC with H-Pab1-MLLE => S5_A4_Isothermal Titration calorimetry-ITC with H-Pab1-MLLE}/isa.assay.xlsx (100%)
 rename assays/{S4_A4_Isothermal Titration calorimetry-ITC with H-Pab1-MLLE => S5_A4_Isothermal Titration calorimetry-ITC with H-Pab1-MLLE}/protocols/.gitkeep (100%)
 rename assays/{S4_A5_X-ray structure analysis of H-Pab1-MLLE => S5_A5_X-ray structure analysis of H-Pab1-MLLE}/README.md (100%)
 rename assays/{S4_A5_X-ray structure analysis of H-Pab1-MLLE => S5_A5_X-ray structure analysis of H-Pab1-MLLE}/dataset/.gitkeep (100%)
 rename assays/{S4_A5_X-ray structure analysis of H-Pab1-MLLE => S5_A5_X-ray structure analysis of H-Pab1-MLLE}/dataset/Pab1_MLLE - Upa1_PAM2.mtz (100%)
 rename assays/{S4_A5_X-ray structure analysis of H-Pab1-MLLE => S5_A5_X-ray structure analysis of H-Pab1-MLLE}/dataset/Pab1_MLLE - Upa1_PAM2.pdb (100%)
 rename assays/{S4_A5_X-ray structure analysis of H-Pab1-MLLE => S5_A5_X-ray structure analysis of H-Pab1-MLLE}/isa.assay.xlsx (100%)
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 rename assays/{S4_A6_Western blot analysis of GST pull-down experiments using G-Pab1-MLLE and PAM2 variants => S5_A6_Western blot analysis of GST pull-down experiments using G-Pab1-MLLE and PAM2 variants}/README.md (100%)
 rename assays/{S4_A6_Western blot analysis of GST pull-down experiments using G-Pab1-MLLE and PAM2 variants => S5_A6_Western blot analysis of GST pull-down experiments using G-Pab1-MLLE and PAM2 variants}/dataset/.gitkeep (100%)
 rename assays/{S4_A6_Western blot analysis of GST pull-down experiments using G-Pab1-MLLE and PAM2 variants => S5_A6_Western blot analysis of GST pull-down experiments using G-Pab1-MLLE and PAM2 variants}/dataset/4C Western blot of GST-Pulldown with G-Pab1-MLLE and HS-PAM2 variants/Fig04_D_Ladder, 4297, 4296, 0202, 0173, 0210_bait 2187_super3.png (100%)
 rename assays/{S4_A6_Western blot analysis of GST pull-down experiments using G-Pab1-MLLE and PAM2 variants => S5_A6_Western blot analysis of GST pull-down experiments using G-Pab1-MLLE and PAM2 variants}/dataset/4C Western blot of GST-Pulldown with G-Pab1-MLLE and HS-PAM2 variants/Fig04_D_V_Ladder, 4297, 4296, 0202, 0173, 0210_bait 2187_super3.png (100%)
 rename assays/{S4_A6_Western blot analysis of GST pull-down experiments using G-Pab1-MLLE and PAM2 variants => S5_A6_Western blot analysis of GST pull-down experiments using G-Pab1-MLLE and PAM2 variants}/dataset/4E Western blot of GST-Pulldown using GST-MLLE and HS-PAM2-PAM2L hybrid variants/Fig04_E_Ladder,4296,4298,0157,0168,0203,0211_bait Pab1-MLLE_super2.png (100%)
 rename assays/{S4_A6_Western blot analysis of GST pull-down experiments using G-Pab1-MLLE and PAM2 variants => S5_A6_Western blot analysis of GST pull-down experiments using G-Pab1-MLLE and PAM2 variants}/dataset/4E Western blot of GST-Pulldown using GST-MLLE and HS-PAM2-PAM2L hybrid variants/Fig04_E_Ladder,4296,4298,0157,0168,0203,0211_bait Rrm4-MLLE3_high4.png (100%)
 rename assays/{S4_A6_Western blot analysis of GST pull-down experiments using G-Pab1-MLLE and PAM2 variants => S5_A6_Western blot analysis of GST pull-down experiments using G-Pab1-MLLE and PAM2 variants}/dataset/4E Western blot of GST-Pulldown using GST-MLLE and HS-PAM2-PAM2L hybrid variants/Fig04_E_V_Ladder,4296,4298,0157,0168,0203,0211_bait Pab1-MLLE_super2.png (100%)
 rename assays/{S4_A6_Western blot analysis of GST pull-down experiments using G-Pab1-MLLE and PAM2 variants => S5_A6_Western blot analysis of GST pull-down experiments using G-Pab1-MLLE and PAM2 variants}/dataset/4E Western blot of GST-Pulldown using GST-MLLE and HS-PAM2-PAM2L hybrid variants/Fig04_E_V_Ladder,4296,4298,0157,0168,0203,0211_bait Rrm4-MLLE3_high4.png (100%)
 rename assays/{S4_A6_Western blot analysis of GST pull-down experiments using G-Pab1-MLLE and PAM2 variants => S5_A6_Western blot analysis of GST pull-down experiments using G-Pab1-MLLE and PAM2 variants}/isa.assay.xlsx (100%)
 rename assays/{S4_A6_Western blot analysis of GST pull-down experiments using G-Pab1-MLLE and PAM2 variants => S5_A6_Western blot analysis of GST pull-down experiments using G-Pab1-MLLE and PAM2 variants}/protocols/.gitkeep (100%)
 rename assays/{S4_A7_Multiple sequence alignment of Pab1-MLLE orthologs => S5_A7_Multiple sequence alignment of Pab1-MLLE orthologs}/README.md (100%)
 rename assays/{S4_A7_Multiple sequence alignment of Pab1-MLLE orthologs => S5_A7_Multiple sequence alignment of Pab1-MLLE orthologs}/dataset/.gitkeep (100%)
 rename assays/{S4_A7_Multiple sequence alignment of Pab1-MLLE orthologs => S5_A7_Multiple sequence alignment of Pab1-MLLE orthologs}/dataset/Pab1-MLLE MSA.dnd (100%)
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 rename assays/{S4_A7_Multiple sequence alignment of Pab1-MLLE orthologs => S5_A7_Multiple sequence alignment of Pab1-MLLE orthologs}/protocols/.gitkeep (100%)

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diff --git a/assays/S4_A2_Purification of H-Pab1-MLLE for structural studies/dataset/Fig S1A, S3A SDS PAGE of purified H-Rrm4-MLLE3, H-Pab1-MLLE.pdf b/assays/S5_A2_Purification of H-Pab1-MLLE for structural studies/dataset/Fig S1A, S3A SDS PAGE of purified H-Rrm4-MLLE3, H-Pab1-MLLE.pdf
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diff --git a/assays/S4_A2_Purification of H-Pab1-MLLE for structural studies/dataset/Fig S1A, S3A SDS PAGE of purified H-Rrm4-MLLE3, H-Pab1-MLLE.png b/assays/S5_A2_Purification of H-Pab1-MLLE for structural studies/dataset/Fig S1A, S3A SDS PAGE of purified H-Rrm4-MLLE3, H-Pab1-MLLE.png
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diff --git a/assays/S4_A2_Purification of H-Pab1-MLLE for structural studies/dataset/Fig S1A, S3A SDS PAGE of purified H-Rrm4-MLLE3, H-Pab1-MLLE.pptx b/assays/S5_A2_Purification of H-Pab1-MLLE for structural studies/dataset/Fig S1A, S3A SDS PAGE of purified H-Rrm4-MLLE3, H-Pab1-MLLE.pptx
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diff --git a/assays/S4_A3_Size exclusion chromotography of H-Pab1-MLLE/README.md b/assays/S5_A3_Size exclusion chromotography of H-Pab1-MLLE/README.md
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diff --git a/assays/S4_A3_Size exclusion chromotography of H-Pab1-MLLE/dataset/Size exclusion chromotography of H-Pab1-MLLE (P4794).pdf b/assays/S5_A3_Size exclusion chromotography of H-Pab1-MLLE/dataset/Size exclusion chromotography of H-Pab1-MLLE (P4794).pdf
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diff --git a/assays/S4_A4_Isothermal Titration calorimetry-ITC with H-Pab1-MLLE/README.md b/assays/S5_A4_Isothermal Titration calorimetry-ITC with H-Pab1-MLLE/README.md
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