From 639c356526c4ff104ebe8e5775b36bc79a499146 Mon Sep 17 00:00:00 2001
From: Srimeenakshi Sankaranarayanan <sankaran@hhu.de>
Date: Thu, 8 Aug 2024 21:27:20 +0200
Subject: [PATCH] folder rename

---
 .gitattributes                                              | 6 ++++++
 .../{processed_file => processed_reads}/FA_1.tabular        | 0
 .../{processed_file => processed_reads}/FA_2.tabular        | 0
 .../{processed_file => processed_reads}/FA_3.tabular        | 0
 .../{processed_file => processed_reads}/FK_1.tabular        | 0
 .../{processed_file => processed_reads}/FK_2.tabular        | 0
 .../{processed_file => processed_reads}/FK_3.tabular        | 0
 7 files changed, 6 insertions(+)
 rename assays/S6_A1_RNAseq_data/dataset/{processed_file => processed_reads}/FA_1.tabular (100%)
 rename assays/S6_A1_RNAseq_data/dataset/{processed_file => processed_reads}/FA_2.tabular (100%)
 rename assays/S6_A1_RNAseq_data/dataset/{processed_file => processed_reads}/FA_3.tabular (100%)
 rename assays/S6_A1_RNAseq_data/dataset/{processed_file => processed_reads}/FK_1.tabular (100%)
 rename assays/S6_A1_RNAseq_data/dataset/{processed_file => processed_reads}/FK_2.tabular (100%)
 rename assays/S6_A1_RNAseq_data/dataset/{processed_file => processed_reads}/FK_3.tabular (100%)

diff --git a/.gitattributes b/.gitattributes
index 39a0559..6d6266e 100644
--- a/.gitattributes
+++ b/.gitattributes
@@ -19,3 +19,9 @@ assays/S5_A2_HyperTRIBE_motif_analysis/Khd4-Ada-Gfp[[:space:]]editing[[:space:]]
 assays/S5_A2_HyperTRIBE_motif_analysis/Khd4-Ada-Gfp[[:space:]]edited[[:space:]]transcripts[[:space:]]lacking[[:space:]]the[[:space:]]AUACCC[[:space:]]motif[[:space:]]do[[:space:]]not[[:space:]]show[[:space:]]enrichment[[:space:]]for[[:space:]]other[[:space:]]motifs.html filter=lfs diff=lfs merge=lfs -text
 assays/S5_A3_GO-term/dataset/Umaydis_GOterm_annotation.gmt filter=lfs diff=lfs merge=lfs -text
 assays/S5_A3_GO-term/dataset/cytoscape_network_GOterm.cys filter=lfs diff=lfs merge=lfs -text
+assays/S6_A1_RNAseq_data/dataset/raw_read_reads/khd4D_rep1_filament.fastq.gz filter=lfs diff=lfs merge=lfs -text
+assays/S6_A1_RNAseq_data/dataset/raw_read_reads/khd4D_rep2_filament.fastq.gz filter=lfs diff=lfs merge=lfs -text
+assays/S6_A1_RNAseq_data/dataset/raw_read_reads/khd4D_rep3_filament.fastq.gz filter=lfs diff=lfs merge=lfs -text
+assays/S6_A1_RNAseq_data/dataset/raw_read_reads/wt_rep1_filament.fastq.gz filter=lfs diff=lfs merge=lfs -text
+assays/S6_A1_RNAseq_data/dataset/raw_read_reads/wt_rep2_filament.fastq.gz filter=lfs diff=lfs merge=lfs -text
+assays/S6_A1_RNAseq_data/dataset/raw_read_reads/wt_rep3_filament.fastq.gz filter=lfs diff=lfs merge=lfs -text
diff --git a/assays/S6_A1_RNAseq_data/dataset/processed_file/FA_1.tabular b/assays/S6_A1_RNAseq_data/dataset/processed_reads/FA_1.tabular
similarity index 100%
rename from assays/S6_A1_RNAseq_data/dataset/processed_file/FA_1.tabular
rename to assays/S6_A1_RNAseq_data/dataset/processed_reads/FA_1.tabular
diff --git a/assays/S6_A1_RNAseq_data/dataset/processed_file/FA_2.tabular b/assays/S6_A1_RNAseq_data/dataset/processed_reads/FA_2.tabular
similarity index 100%
rename from assays/S6_A1_RNAseq_data/dataset/processed_file/FA_2.tabular
rename to assays/S6_A1_RNAseq_data/dataset/processed_reads/FA_2.tabular
diff --git a/assays/S6_A1_RNAseq_data/dataset/processed_file/FA_3.tabular b/assays/S6_A1_RNAseq_data/dataset/processed_reads/FA_3.tabular
similarity index 100%
rename from assays/S6_A1_RNAseq_data/dataset/processed_file/FA_3.tabular
rename to assays/S6_A1_RNAseq_data/dataset/processed_reads/FA_3.tabular
diff --git a/assays/S6_A1_RNAseq_data/dataset/processed_file/FK_1.tabular b/assays/S6_A1_RNAseq_data/dataset/processed_reads/FK_1.tabular
similarity index 100%
rename from assays/S6_A1_RNAseq_data/dataset/processed_file/FK_1.tabular
rename to assays/S6_A1_RNAseq_data/dataset/processed_reads/FK_1.tabular
diff --git a/assays/S6_A1_RNAseq_data/dataset/processed_file/FK_2.tabular b/assays/S6_A1_RNAseq_data/dataset/processed_reads/FK_2.tabular
similarity index 100%
rename from assays/S6_A1_RNAseq_data/dataset/processed_file/FK_2.tabular
rename to assays/S6_A1_RNAseq_data/dataset/processed_reads/FK_2.tabular
diff --git a/assays/S6_A1_RNAseq_data/dataset/processed_file/FK_3.tabular b/assays/S6_A1_RNAseq_data/dataset/processed_reads/FK_3.tabular
similarity index 100%
rename from assays/S6_A1_RNAseq_data/dataset/processed_file/FK_3.tabular
rename to assays/S6_A1_RNAseq_data/dataset/processed_reads/FK_3.tabular
-- 
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