diff --git a/_additional_information/Figures_Datasets_SZ.xlsx b/_additional_information/Figures_Datasets_SZ.xlsx deleted file mode 100644 index 339a93d78674af5a45499165c0bf7e004b2106ec..0000000000000000000000000000000000000000 Binary files a/_additional_information/Figures_Datasets_SZ.xlsx and /dev/null differ diff --git a/_additional_information/Graph_Studies_Assays.png b/_additional_information/Graph_Studies_Assays.png deleted file mode 100644 index 9d72d6739257d8d178e58207cca9545052294e04..0000000000000000000000000000000000000000 Binary files a/_additional_information/Graph_Studies_Assays.png and /dev/null differ diff --git a/_additional_information/Summary_Studies_Assays.md b/_additional_information/Summary_Studies_Assays.md deleted file mode 100644 index 705d0d85b7f3bff2176c830289d2eb1377981a1f..0000000000000000000000000000000000000000 --- a/_additional_information/Summary_Studies_Assays.md +++ /dev/null @@ -1,54 +0,0 @@ -```mermaid -graph LR; - Investigation-->study1_Chapter1 Loss of Khd4 causes defects in polar growth of infectious hyphae; - study1_Characterization_khd4D-->assay1_microscopy_yeast; - study1_Characterization_khd4D-->assay2_microscopy_hyphae; - - Investigation-->study2_characterization_HyperTRIBE_Rrm4_constructs; - study2_characterization_HyperTRIBE_Rrm4_constructs-->assay1_microscopy_DIC; - study2_characterization_HyperTRIBE_Rrm4_constructs-->assay2_microscopy_Rrm4-Gfp; - study2_characterization_HyperTRIBE_Rrm4_constructs-->assay3_protein_expression; - study2_characterization_HyperTRIBE_Rrm4_constructs-->assay4_microscopy_Rfp_Gfp; - - Investigation-->study3_HyperTRIBE_Rrm4; - study3_HyperTRIBE_Rrm4-->assay1_HyperTRIBE_Rrm4_workflow; - study3_HyperTRIBE_Rrm4-->assay2_HyperTRIBE_Rrm4_analysis; - study3_HyperTRIBE_Rrm4-->assay3_HyperTRIBE_Rrm4/iCLIP; - - Investigation-->study4_characterization_HyperTRIBE_Khd4_constructs; - study4_characterization_HyperTRIBE_Khd4_constructs-->assay1_microscopy_DIC_Gfp; - study4_characterization_HyperTRIBE_Khd4_constructs-->assay2_protein_expression; - - Investigation-->study5_HyperTRIBE_Khd4; - study5_HyperTRIBE_Khd4-->assay1_HyperTRIBE_Khd4_workflow; - study5_HyperTRIBE_Khd4-->assay2_HyperTRIBE_Khd4_motif_analysis - study5_HyperTRIBE_Khd4-->assay3_GO-term - - Investigation-->study6_RNAseq; - study6_RNAseq-->assay1_RNAseq_data - study6_RNAseq-->assay2_RNAseq_analysis_khd4/wt_hyphae - study6_RNAseq-->assay3_RNAseq_analysis_yeast_hyphae - study6_RNAseq-->assay4_RNAseq_analysis_specific_targets - - Investigation-->study7_Kat_motif_strains; - study7_Kat_motif_strains-->assay1_microscopy; - study7_Kat_motif_strains-->assay2_Kat_protein_level; - study7_Kat_motif_strains-->assay3_Kat_mRNA_level; - - Investigation-->study8_target_Kat-strains; - study8_target_Kat-strains-->assay1_microscopy-Gfp; - study8_target_Kat-strains-->assay2_relative_fluorescence_level; - - Investigation-->study9_modelling; - study9_modelling-->assay1_?; - - Investigation-->study10_trafficking; - study10_trafficking-->assay1_microscopy_FM464; - study10_trafficking-->assay2_microscopy_CMAC; - - - - - - -```