From b77e0bbfb25c15740c552bb40b924c0de6fdd0a4 Mon Sep 17 00:00:00 2001
From: Sabrina Zander <sabrina.zander@uni-duesseldorf.de>
Date: Mon, 27 Jan 2025 11:23:34 +0000
Subject: [PATCH] rename RNS seq to S4
---
.../README.md | 0
.../dataset/.gitkeep | 0
.../dataset/processed_reads/khd4D_hyphae_1.tabular | 0
.../dataset/processed_reads/khd4D_hyphae_2.tabular | 0
.../dataset/processed_reads/khd4D_hyphae_3.tabular | 0
.../dataset/processed_reads/khd4D_yeast_1.tabular | 0
.../dataset/processed_reads/khd4D_yeast_2.tabular | 0
.../dataset/processed_reads/khd4D_yeast_3.tabular | 0
.../processed_reads/wildtype_hyphae_1.tabular | 0
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.../isa.assay.xlsx | Bin
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...e_abundance_of_transcripts_with_3UTR_AUACCC.html | 0
...he_abundance_of_transcripts_with_3UTR_AUACCC.qmd | 0
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36 files changed, 0 insertions(+), 0 deletions(-)
rename assays/{S6_A1_RNAseq_data => S4_A1_RNAseq_data}/README.md (100%)
rename assays/{S6_A1_RNAseq_data => S4_A1_RNAseq_data}/dataset/.gitkeep (100%)
rename assays/{S6_A1_RNAseq_data => S4_A1_RNAseq_data}/dataset/processed_reads/khd4D_hyphae_1.tabular (100%)
rename assays/{S6_A1_RNAseq_data => S4_A1_RNAseq_data}/dataset/processed_reads/khd4D_hyphae_2.tabular (100%)
rename assays/{S6_A1_RNAseq_data => S4_A1_RNAseq_data}/dataset/processed_reads/khd4D_hyphae_3.tabular (100%)
rename assays/{S6_A1_RNAseq_data => S4_A1_RNAseq_data}/dataset/processed_reads/khd4D_yeast_1.tabular (100%)
rename assays/{S6_A1_RNAseq_data => S4_A1_RNAseq_data}/dataset/processed_reads/khd4D_yeast_2.tabular (100%)
rename assays/{S6_A1_RNAseq_data => S4_A1_RNAseq_data}/dataset/processed_reads/khd4D_yeast_3.tabular (100%)
rename assays/{S6_A1_RNAseq_data => S4_A1_RNAseq_data}/dataset/processed_reads/wildtype_hyphae_1.tabular (100%)
rename assays/{S6_A1_RNAseq_data => S4_A1_RNAseq_data}/dataset/processed_reads/wildtype_hyphae_2.tabular (100%)
rename assays/{S6_A1_RNAseq_data => S4_A1_RNAseq_data}/dataset/processed_reads/wildtype_hyphae_3.tabular (100%)
rename assays/{S6_A1_RNAseq_data => S4_A1_RNAseq_data}/dataset/processed_reads/wildtype_yeast_1.tabular (100%)
rename assays/{S6_A1_RNAseq_data => S4_A1_RNAseq_data}/dataset/processed_reads/wildtype_yeast_2.tabular (100%)
rename assays/{S6_A1_RNAseq_data => S4_A1_RNAseq_data}/dataset/processed_reads/wildtype_yeast_3.tabular (100%)
rename assays/{S6_A1_RNAseq_data => S4_A1_RNAseq_data}/dataset/raw_reads/khd4D_rep1_filament.fastq.gz (100%)
rename assays/{S6_A1_RNAseq_data => S4_A1_RNAseq_data}/dataset/raw_reads/khd4D_rep1_yeast.fastq.gz (100%)
rename assays/{S6_A1_RNAseq_data => S4_A1_RNAseq_data}/dataset/raw_reads/khd4D_rep2_filament.fastq.gz (100%)
rename assays/{S6_A1_RNAseq_data => S4_A1_RNAseq_data}/dataset/raw_reads/khd4D_rep2_yeast.fastq.gz (100%)
rename assays/{S6_A1_RNAseq_data => S4_A1_RNAseq_data}/dataset/raw_reads/khd4D_rep3_filament.fastq.gz (100%)
rename assays/{S6_A1_RNAseq_data => S4_A1_RNAseq_data}/dataset/raw_reads/khd4D_rep3_yeast.fastq.gz (100%)
rename assays/{S6_A1_RNAseq_data => S4_A1_RNAseq_data}/dataset/raw_reads/wt_rep1_filament.fastq.gz (100%)
rename assays/{S6_A1_RNAseq_data => S4_A1_RNAseq_data}/dataset/raw_reads/wt_rep1_yeast.fastq.gz (100%)
rename assays/{S6_A1_RNAseq_data => S4_A1_RNAseq_data}/dataset/raw_reads/wt_rep2_filament.fastq.gz (100%)
rename assays/{S6_A1_RNAseq_data => S4_A1_RNAseq_data}/dataset/raw_reads/wt_rep2_yeast.fastq.gz (100%)
rename assays/{S6_A1_RNAseq_data => S4_A1_RNAseq_data}/dataset/raw_reads/wt_rep3_filament.fastq.gz (100%)
rename assays/{S6_A1_RNAseq_data => S4_A1_RNAseq_data}/dataset/raw_reads/wt_rep3_yeast.fastq.gz (100%)
rename assays/{S6_A1_RNAseq_data => S4_A1_RNAseq_data}/isa.assay.xlsx (100%)
rename assays/{S6_A1_RNAseq_data => S4_A1_RNAseq_data}/protocols/.gitkeep (100%)
rename assays/{S6_A2_RNAseq_analysis_khd4D_vs_wt_hyphae => S4_A2_RNAseq_analysis_khd4D_vs_wt_hyphae}/README.md (100%)
rename assays/{S6_A2_RNAseq_analysis_khd4D_vs_wt_hyphae => S4_A2_RNAseq_analysis_khd4D_vs_wt_hyphae}/dataset/.gitkeep (100%)
rename assays/{S6_A2_RNAseq_analysis_khd4D_vs_wt_hyphae => S4_A2_RNAseq_analysis_khd4D_vs_wt_hyphae}/dataset/06 khd4_deletion_increases_the_abundance_of_transcripts_with_3UTR_AUACCC.html (100%)
rename assays/{S6_A2_RNAseq_analysis_khd4D_vs_wt_hyphae => S4_A2_RNAseq_analysis_khd4D_vs_wt_hyphae}/dataset/06 khd4_deletion_increases_the_abundance_of_transcripts_with_3UTR_AUACCC.qmd (100%)
rename assays/{S6_A2_RNAseq_analysis_khd4D_vs_wt_hyphae => S4_A2_RNAseq_analysis_khd4D_vs_wt_hyphae}/dataset/DESeq2_hyphae_wtvkd.Rmd (100%)
rename assays/{S6_A2_RNAseq_analysis_khd4D_vs_wt_hyphae => S4_A2_RNAseq_analysis_khd4D_vs_wt_hyphae}/dataset/DESeq2_hyphae_wtvkd.html (100%)
rename assays/{S6_A2_RNAseq_analysis_khd4D_vs_wt_hyphae => S4_A2_RNAseq_analysis_khd4D_vs_wt_hyphae}/isa.assay.xlsx (100%)
rename assays/{S6_A2_RNAseq_analysis_khd4D_vs_wt_hyphae => S4_A2_RNAseq_analysis_khd4D_vs_wt_hyphae}/protocols/.gitkeep (100%)
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diff --git a/assays/S6_A2_RNAseq_analysis_khd4D_vs_wt_hyphae/isa.assay.xlsx b/assays/S4_A2_RNAseq_analysis_khd4D_vs_wt_hyphae/isa.assay.xlsx
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rename from assays/S6_A2_RNAseq_analysis_khd4D_vs_wt_hyphae/isa.assay.xlsx
rename to assays/S4_A2_RNAseq_analysis_khd4D_vs_wt_hyphae/isa.assay.xlsx
diff --git a/assays/S6_A2_RNAseq_analysis_khd4D_vs_wt_hyphae/protocols/.gitkeep b/assays/S4_A2_RNAseq_analysis_khd4D_vs_wt_hyphae/protocols/.gitkeep
similarity index 100%
rename from assays/S6_A2_RNAseq_analysis_khd4D_vs_wt_hyphae/protocols/.gitkeep
rename to assays/S4_A2_RNAseq_analysis_khd4D_vs_wt_hyphae/protocols/.gitkeep
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