Commits · main · Usadellab / Teosinte · GitLab

Jan 04, 2025
- add: pcoa analyses of environmental and morphological data · 0aa99bc4
  Joseph Atemia authored Jan 04, 2025
  
  0aa99bc4
- update: cleanup code base · 643a61a5
  Joseph Atemia authored Jan 04, 2025
  
  643a61a5
Jan 03, 2025
- add: teosinte genotype pcoa analyses · 4c2192aa
  Joseph Atemia authored Jan 03, 2025
  
  4c2192aa
Dec 17, 2024
- update: isa metadata · 7c4f97e6
  Joseph Atemia authored Dec 17, 2024
  
  7c4f97e6
- update: isa metadata · f824eac8
  Joseph Atemia authored Dec 17, 2024
  
  f824eac8
- add: invenio validation · 7cbbc952
  Joseph Atemia authored Dec 17, 2024
  
  7cbbc952
- update: isa.investigation metadata · 723f5314
  Joseph Atemia authored Dec 17, 2024
  
  723f5314
Dec 16, 2024
- add: Supplimentary xlsx tables for publication · f58f57e9
  Joseph Atemia authored Dec 16, 2024
  
  f58f57e9
- update: genotype PCA pdfs for publication · 88804b6e
  Joseph Atemia authored Dec 16, 2024
  
  88804b6e
- doc: update README.md Jaccard Index · a2036bac
  Joseph Atemia authored Dec 16, 2024
  
  a2036bac
- update: jaccard grid svg and pdf plots for publication · 3b6c100f
  Joseph Atemia authored Dec 16, 2024
  
  3b6c100f
- add: genetic data and meta data to Git LFS · 1eb8a266
  Joseph Atemia authored Dec 16, 2024
  
  1eb8a266
- update: track individual files in studies/initial_data/resources/data/ with Git LFS · c63cff45
  Joseph Atemia authored Dec 16, 2024
  
  c63cff45
- update: Stop tracking *.md files with Git LFS · 450ac502
  Joseph Atemia authored Dec 16, 2024
  
  450ac502
- doc: update README.md · d2f0fea5
  Joseph Atemia authored Dec 16, 2024
  
  d2f0fea5
- Merge remote-tracking branch 'origin/isa' · c8840f9e
  Joseph Atemia authored Dec 16, 2024
  c8840f9e
Dec 15, 2024
- add: phenotype dist plots · d0da3d4f
  Joseph Atemia authored Dec 16, 2024
  
  d0da3d4f
- add: Tracked large files with Git LFS · 0c798388
  Joseph Atemia authored Dec 15, 2024
  
  0c798388
- add: genetic diversity directory · 8d7d3960
  Joseph Atemia authored Dec 15, 2024
  
  8d7d3960
- add: Track large files in data directory with Git LFS · dbaefa47
  Joseph Atemia authored Dec 15, 2024
  
  dbaefa47
- add: phenotype pca workflow · 5e7ef9d2
  Joseph Atemia authored Dec 15, 2024
  
  5e7ef9d2
- update: directory documentation · 08f3c8c1
  Joseph Atemia authored Dec 15, 2024
  
  08f3c8c1
- doc: update README.md · acf99bcf
  Joseph Atemia authored Dec 15, 2024
  
  acf99bcf
- update: README.md · 6b9cab68
  Joseph Atemia authored Dec 15, 2024
  
  6b9cab68
- chore: reorganize directory structure for better modularity · 84020d7b
  Joseph Atemia authored Dec 15, 2024
  
  84020d7b
- add: directory description · f1c68aa9
  Joseph Atemia authored Dec 15, 2024
  
  f1c68aa9
- Merge branch 'isa' into 'main' · 8cfd67d6
  Joseph Atemia authored Dec 15, 2024
  8cfd67d6
- update: isa files · dce5108a
  Joseph Atemia authored Dec 15, 2024
  
  dce5108a
- add isa files · b481f380
  Joseph Atemia authored Dec 15, 2024
  
  b481f380
Dec 12, 2024
- add: arc default dir for isa metadata tables · aa3e7e8d
  Joseph Atemia authored Dec 12, 2024
  
  aa3e7e8d
- Merge branch 'isa' into 'main' · 714735e0
  Joseph Atemia authored Dec 12, 2024
  714735e0
Dec 11, 2024
- update: centralized lab-book · c956bfee
  Joseph Atemia authored Dec 11, 2024
  
  c956bfee
Dec 04, 2024
- chore: restructure directories and relocate final cleaned GWAS data · ceae21b4
  Joseph Atemia authored Dec 04, 2024
  
  ceae21b4
- chore: restructure directories and relocate final cleaned GWAS data · ed4fec69
  Joseph Atemia authored Dec 04, 2024
  
  ed4fec69
Nov 22, 2024
- add: Git LFS tracking for genetic variant data, admixture outputs, climate... · 7a7dbbd3
  Joseph Atemia authored Nov 22, 2024
  7a7dbbd3
Nov 21, 2024
- update: setup Git LFS tracking for genetic variant data, admixture outputs,... · 3bb2efb3
  Joseph Atemia authored Nov 21, 2024
  3bb2efb3
Nov 19, 2024
- add: Git LFS tracking for GAPIT results files · 5df1f27f
  Joseph Atemia authored Nov 19, 2024
  5df1f27f
Nov 18, 2024
- add: set up Git LFS tracking for GAPIT results · 9b3d78e0
  Joseph Atemia authored Nov 18, 2024
  9b3d78e0
- fix: add placeholder workflow.cwl files to resolve validate-arc error in GitLab · 3f0fc2e4
  Joseph Atemia authored Nov 18, 2024
  
  3f0fc2e4
- fix: add placeholder workflow.cwl files to resolve validate-arc error in GitLab · d1fd2caa
  Joseph Atemia authored Nov 18, 2024
  
  d1fd2caa