Binding peaks for the sample: rep_1

ucsc chrom start end top strand geneID genesymbol gtype tss atg annotation function topcoverage area_coverage cg
ucsc_link NC_006677_621H_old 293385 293870 293654 + GOX0278 GOX0278 upstream 165 165 cytochrome d ubiquinol oxidase subunit I 7.639 4900.2 unknown
ucsc_link NC_006677_621H_old 667664 668119 667899 - GOX0626 GOX0626 upstream 74 74 thioredoxin 7.045 4025.7 unknown
ucsc_link NC_006677_621H_old 2176891 2177320 2177099 - GOX1988 GOX1988 upstream 160 160 pyridoxamine 5'-phosphate oxidase catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate 6.154 1968.7 unknown
ucsc_link NC_006675_pGOX4 5769 6171 5965 + fake fake intergenic nan nan None None 13.411 5851.5 unknown
ucsc_link NC_006677_621H_old 2351013 2351688 2351214 - GOX2142 GOX2142 upstream 149 149 hypothetical protein 7.215 4528.8 unknown
ucsc_link NC_006677_621H_old 328161 328546 328363 + GOX0310 GOX0310 upstream 69 69 NAD(P) transhydrogenase subunit alpha 4.286 1714.4 unknown
ucsc_link NC_006677_621H_old 1174239 1174786 1174552 - GOX1070 rho upstream 265 265 transcription termination factor Rho An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes 5.390 6710.7 unknown
ucsc_link NC_006677_621H_old 751332 751854 751572 - GOX0691 GOX0691 upstream 40 40 acriflavin resistance efflux transporter 3.989 8578.0 unknown
ucsc_link NC_006677_621H_old 107121 107543 107338 + GOX0091 GOX0091 upstream 59 59 hypothetical protein 2.801 968.5 unknown
ucsc_link NC_006677_621H_old 943152 943594 943401 - GOX0874 hemH upstream 94 94 ferrochelatase protoheme ferro-lyase catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme involved in protoheme biosynthesis in some organisms this protein is membrane-associated while in others it is cytosolic 3.353 3731.7 unknown
ucsc_link NC_006677_621H_old 1644435 1644837 1644577 + GOX1500 GOX1500 upstream -35 -35 hypothetical protein 3.310 3334.1 unknown
ucsc_link NC_006677_621H_old 368405 368844 368633 - GOX0347 GOX0347 upstream -34 -34 hypothetical protein 2.631 1175.2 unknown
ucsc_link NC_006677_621H_old 893094 893585 893366 + GOX0824 GOX0824 upstream -161 -161 protein translation initiation factor 3 2.843 2436.9 unknown
ucsc_link NC_006677_621H_old 1559125 1559505 1559326 + GOX1427 thyX upstream 191 191 FAD-dependent thymidylate synthase flavin dependent thymidylate synthase ThyX thymidylate synthase complementing protein catalyzes the formation of dTMP and tetrahydrofolate from dUMP and methylenetetrahydrofolate the enzyme from Mycobacterium tuberculosis forms homotetramers uses FAD as a cofactor 2.080 970.1 unknown
ucsc_link NC_006672_pGOX1 20995 21431 21202 + fake fake intergenic nan nan None None 2.546 1007.4 unknown
ucsc_link NC_006677_621H_old 452676 453095 452873 - GOX0426 GOX0426 upstream 712 712 hypothetical protein 1.995 979.5 unknown
ucsc_link NC_006677_621H_old 659781 660211 659994 + GOX0617 GOX0617 upstream -119 -119 hypothetical protein 2.122 1295.7 unknown
ucsc_link NC_006677_621H_old 198806 199165 198991 - GOX0182 GOX0182 upstream 141 141 hypothetical protein 2.164 543.3 unknown
ucsc_link NC_006677_621H_old 1214993 1215395 1215184 - GOX1107 GOX1107 upstream 19 19 O-antigen biosynthesis protein RfbC 2.546 1830.4 unknown
ucsc_link NC_006677_621H_old 2256834 2257298 2257062 - GOX2060 GOX2060 upstream -26 -26 hypothetical protein 1.995 803.6 unknown
ucsc_link NC_006677_621H_old 528340 528805 528545 + GOX0506 GOX0506 upstream 162 162 RNA polymerase factor sigma-32 binds with the catalytic core of RNA polymerase to produce the holoenzyme this sigma factor is responsible for the expression of heat shock promoters 2.504 1968.6 unknown
ucsc_link NC_006677_621H_old 1662018 1662397 1662259 + GOX1508 GOX1508 upstream 511 511 hypothetical protein 2.207 735.9 unknown
ucsc_link NC_006677_621H_old 910413 910831 910622 - GOX0843 GOX0843 upstream -116 -116 ADP-ribose pyrophosphatase 2.164 1067.8 unknown
ucsc_link NC_006677_621H_old 448658 449078 448934 - GOX0423 fliG upstream 143 143 flagellar motor switch protein G One of three proteins involved in switching the direction of the flagellar rotation 2.080 759.9 unknown
ucsc_link NC_006677_621H_old 698491 698882 698672 + GOX0649 GOX0649 upstream 109 109 sugar-proton symporter 2.164 2193.2 unknown
ucsc_link NC_006677_621H_old 1188365 1188804 1188605 - GOX1082 GOX1082 upstream 24 24 hypothetical protein 2.377 1554.1 unknown
ucsc_link NC_006677_621H_old 946364 946912 946613 - GOX0877 murQ upstream 395 395 N-acetylmuramic acid 6-phosphate etherase catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate involved in MurNAc dissimilation pathway 2.249 1465.8 unknown
ucsc_link NC_006677_621H_old 1075884 1076289 1076015 + GOX0978 GOX0978 upstream 222 222 bifunctional riboflavin biosynthesis protein RibD 2.759 2976.2 unknown
ucsc_link NC_006677_621H_old 1228742 1229129 1228908 + GOX1122 GOX1122 upstream -144 -144 NAD-dependent aldehyde dehydrogenase 1.782 3085.1 unknown
ucsc_link NC_006677_621H_old 1229742 1230149 1229958 + GOX1122 GOX1122 gene -1194 -1194 NAD-dependent aldehyde dehydrogenase 2.334 3085.1 unknown
ucsc_link NC_006677_621H_old 1410569 1410960 1410768 + GOX1286 GOX1286 upstream 159 159 hypothetical protein 2.122 956.6 unknown
ucsc_link NC_006677_621H_old 1567132 1567574 1567297 - GOX1433 GOX1433 gene -797 -797 DnaJ-like protein 2.504 1931.9 unknown
ucsc_link NC_006677_621H_old 1829567 1829927 1829736 + GOX1672 GOX1672 upstream -11 -11 tRNA-Gly 1.995 668.4 unknown
ucsc_link NC_006677_621H_old 1351201 1351659 1351394 + GOX1241 GOX1241 upstream -71 -71 Sec-independent protein translocase protein TatA 2.207 1161.4 unknown
ucsc_link NC_006677_621H_old 1042894 1043380 1043099 + GOX0951 GOX0951 gene -2697 -2697 hypothetical protein similar to nodulation factor NolG 2.037 1087.7 unknown
ucsc_link NC_006677_621H_old 1372793 1373181 1372984 - GOX1258 GOX1258 upstream -41 -41 hypothetical protein 2.122 1741.3 unknown
ucsc_link NC_006673_pGOX2 8105 8505 8307 + fake fake intergenic nan nan None None 2.080 982.1 unknown
ucsc_link NC_006677_621H_old 1084027 1084391 1084206 - GOX0987 pqqA upstream 43 43 coenzyme PQQ synthesis protein PqqA Required for coenzyme pyrroloquinoline quinone (PQQ) biosynthesis probably provides the glutamate and tyrosine residues that are cross-linked and modified to form the coenzyme 2.122 2225.9 unknown
ucsc_link NC_006677_621H_old 1599268 1599794 1599558 - GOX1461 GOX1461 upstream 49 49 dipeptidyl peptidase IV 2.292 1701.4 unknown
ucsc_link NC_006677_621H_old 752872 753328 753104 - GOX0693 GOX0693 gene -1780 -1780 hypothetical protein 2.377 8578.0 unknown
ucsc_link NC_006677_621H_old 768522 768886 768684 + GOX0707 GOX0707 upstream -24 -24 DNA starvation/stationary phase protection protein Dps binds DNA in a non-sequence-specific manner and is abundant during stationary phase forms a DNA-protein crystal that protects DNA from damage required for normal starvation response and long-term stationary viability forms a homododecameric complex and sequesters iron which provides protection against oxidative damage 1.867 1286.9 unknown
ucsc_link NC_006677_621H_old 1071120 1071525 1071332 - GOX0972 GOX0972 upstream -111 -111 cation efflux system protein CzcB 1.952 1122.9 unknown
ucsc_link NC_006677_621H_old 2049734 2050110 2049919 - GOX1870 GOX1870 upstream -24 -24 hypothetical protein 1.952 642.2 unknown