From a2a823a12d35efefd46653014ebbdf15ea586494 Mon Sep 17 00:00:00 2001 From: Kathryn Dumschott <k.dumschott@fz-juelich.de> Date: Tue, 24 Jun 2025 14:28:54 +0000 Subject: [PATCH] Edit README.md --- studies/ExperimentalSetup/README.md | 33 ++++++++++++++++++++++++++--- 1 file changed, 30 insertions(+), 3 deletions(-) diff --git a/studies/ExperimentalSetup/README.md b/studies/ExperimentalSetup/README.md index 509eaae..94e65d6 100644 --- a/studies/ExperimentalSetup/README.md +++ b/studies/ExperimentalSetup/README.md @@ -44,12 +44,39 @@ - **Leaf relative water content:** Collected for all plots of both treatments on day 47. - See Assay: [Relative_Water_Content](https://git.nfdi4plants.org/usadellab/quinoa_chileanfieldtrial/-/tree/main/assays/RelativeWaterContent?ref_type=heads) -- **Thermal Infrared imaging:** All plots (both the FI and RI treatments) were imaged in the afternoon of 46 and 47 DAS. In the afternoons of 48, 49 and 50 DAS all plots of blocks 2 and 5, 1 and 4, and 3 and 6, were imaged respectively. Finally, at 47 DAS, all plots were also imaged in the late morning when the leaves were still wet with morning dew. - - See Assay: [Imaging](https://git.nfdi4plants.org/usadellab/quinoa_chileanfieldtrial/-/tree/main/assays/Imaging?ref_type=heads) +- **Thermal Infrared imaging:** Collected images according to table below. + - See Assay: [Imaging](https://git.nfdi4plants.org/usadellab/quinoa_chileanfieldtrial/-/tree/main/assays/Imaging?ref_type=heads) + +| **Sampling Days** | **Blocks** | +| :------: | ------ | +| Day 46 (afternoon)| All plots | +| Day 47 (afternoon)| All plots | +| Day 47 (late morning*)| All plots | +|Day 48 (afternoon)|2 and 5| +|Day 49 (afternoon)|1 and 4| +|Day 50 (afternoon)|3 and 6| + +*leaves were still wet with morning dew. + +Blocks represented differences in the date and time of imaging, they were referred to as repetitions with blocks 1 and 4 assigned to repetition 1, blocks 2 and 5 to repetition 2, and blocks 3 and 6 to repetition 3. Plots were always captured in treatment pairs (RI after FI or vice versa). + +- **Hyperspectral imaging:** Collected images according to table below. -- **Hyperspectral imaging:** The plots of blocks 1 and 4, and 2 and 5 were imaged at 49 and 48 DAS, respectively, between 15:00 and 16:00. The plots of blocks 3 and 6 were imaged at 49 DAS between 16:00 and 17:00. As blocks represented differences in the date and time of imaging, they were referred to as repetitions with blocks 1 and 4 assigned to repetition 1, blocks 2 and 5 to repetition 2, and blocks 3 and 6 to repetition 3. Plots were always captured in treatment pairs (RI after FI or vice versa). - See Assay: [Imaging](https://git.nfdi4plants.org/usadellab/quinoa_chileanfieldtrial/-/tree/main/assays/Imaging?ref_type=heads) +| **Sampling Days** | **Blocks** | +| :------: | ------ | +| Day 46 (afternoon)| All plots | +| Day 47 (afternoon)| All plots | +| Day 47 (late morning*)| All plots | +|Day 48 (between 15:00 and 16:00)|2 and 5| +|Day 49 (between 15:00 and 16:00)|1 and 4| +|Day 49 (between 16:00 and 17:00)|3 and 6| + +Blocks represented differences in the date and time of imaging, they were referred to as repetitions with blocks 1 and 4 assigned to repetition 1, blocks 2 and 5 to repetition 2, and blocks 3 and 6 to repetition 3. Plots were always captured in treatment pairs (RI after FI or vice versa). + + + ## References [1] Sosa-Zuniga, V.; Brito, V.; Fuentes, F.; Steinfort, U. Phenological growth stages of quinoa (Chenopodium quinoa) based on the BBCH scale. Ann. Appl. Biol. 2017, 171, 117–124. \ No newline at end of file -- GitLab