From 015cdd7980516ed80727a8cc66391b09dcd9f14d Mon Sep 17 00:00:00 2001 From: Angela Kranz <a.kranz@fz-juelich.de> Date: Sun, 17 Nov 2024 07:23:03 +0000 Subject: [PATCH] Update README.md --- README.md | 6 ++++-- 1 file changed, 4 insertions(+), 2 deletions(-) diff --git a/README.md b/README.md index 1e72e0c..74751be 100644 --- a/README.md +++ b/README.md @@ -14,7 +14,7 @@ The blackcurrant (*Ribes nigrum* L., family Grossulariaceae) is a perennial shru ### Studies -The studies encompass all plant growth experiments that were performed to obtain samples for genome sequencing, RNA-Seq experiments, and metabolite analysis. +The [Studies](https://git.nfdi4plants.org/usadellab/ribes_nigrum_genome/-/tree/main/studies?ref_type=heads) folder contains all plant growth experiments that were performed to obtain samples for genome sequencing, RNA-Seq experiments, and metabolite analysis. [_Ribes nigrum_ genome](https://git.nfdi4plants.org/usadellab/ribes_nigrum_genome/-/tree/main/studies/Ribes_nigrum_genome?ref_type=heads) @@ -24,6 +24,8 @@ The studies encompass all plant growth experiments that were performed to obtain ### Assays +The [Assays](https://git.nfdi4plants.org/usadellab/ribes_nigrum_genome/-/tree/main/assays?ref_type=heads) folder contains all experiments that were performed to generate sequencing data (DNA and RNA) as well as metabolite data that were further analyzed. The results of the subsequent analysis can be found in the [Runs](https://git.nfdi4plants.org/usadellab/ribes_nigrum_genome/-/tree/main/runs?ref_type=heads) folder. + [Genome Sequencing](https://git.nfdi4plants.org/usadellab/ribes_nigrum_genome/-/tree/main/assays/Ribes_nigrum_genome_sequencing?ref_type=heads) [RNASeq (Drought)](https://git.nfdi4plants.org/usadellab/ribes_nigrum_genome/-/tree/main/assays/RNASeq_drought/dataset?ref_type=heads) @@ -32,7 +34,7 @@ The studies encompass all plant growth experiments that were performed to obtain ### Runs -Results of the genome sequencing and transcriptome analysis +Results of the genome sequencing and transcriptome analysis. [Ribes nigrum genome annotation](https://git.nfdi4plants.org/usadellab/ribes_nigrum_genome/-/tree/main/runs/Ribes_nigrum_genome?ref_type=heads) -- GitLab