diff --git a/studies/Ribes_nigrum_genome/README.md b/studies/Ribes_nigrum_genome/README.md index 2afaf75c1667d31b759bb6e82cf18d517d41b7e3..34bf9c647aa3ed4bef481ebba5a7379927ba05e2 100644 --- a/studies/Ribes_nigrum_genome/README.md +++ b/studies/Ribes_nigrum_genome/README.md @@ -1,8 +1,8 @@ # *Ribes nigrum* genome sequencing experiment - To generate a blackcurrant genome assembly, DNA of the cultivar *R. nigrum* Rosenthals Langtraubige was used. DNA was extracted from young leaves of a single adult plant. Sequencing was performed with Oxford Nanopore Technologies, PacBio HiFi and Illumina. + ## Study metadata This is an overview about the metadata for the *R. nigrum* genome sequencing experiment. The metadata can also be found in the [isa.study file](https://git.nfdi4plants.org/usadellab/ribes_nigrum_genome/-/blob/main/studies/Ribes_nigrum_genome/isa.study.xlsx?ref_type=heads). @@ -14,4 +14,15 @@ This is an overview about the metadata for the *R. nigrum* genome sequencing exp ## Experimental set-up - \ No newline at end of file + + + +## Related repositories and files + +After harvesting of leaves, the following steps were performed: + +[DNA isolation](https://git.nfdi4plants.org/usadellab/ribes_nigrum_genome/-/tree/main/assays/Ribes_nigrum_genome_sequencing?ref_type=heads) +[Library preparation](https://git.nfdi4plants.org/usadellab/ribes_nigrum_genome/-/tree/main/assays/Ribes_nigrum_genome_sequencing?ref_type=heads) +[Sequencing](https://git.nfdi4plants.org/usadellab/ribes_nigrum_genome/-/tree/main/assays/Ribes_nigrum_genome_sequencing?ref_type=heads) +[Genome assembly](https://git.nfdi4plants.org/usadellab/ribes_nigrum_genome/-/tree/main/runs/Ribes_nigrum_genome?ref_type=heads) +Genome analysis \ No newline at end of file