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ricinus_proteome_arc

Legacy data on Ricinus proteome from Nicole Linka and Thomas Wrobel

setting up this arc

using arcCommander v0.3.1

arc init
arc i create -i "Ricinus proteome"
mkdir _NicolesData; touch _NicolesData/.gitkeep

add raw dataset as retrieved from Anja Stefanski via Sciebo (06.04.2022)

setup assay structure

arc assay add -s "2012_ricinus_proteome_wrobel" -a "2012_proteome_data_bmfz_stefanski"

run md5s on downloaded data

md5 ~/Downloads/Daten\ Linka/*.raw > _NicolesData/raw_data_md5s.txt

Add large data to gitignore for now...

printf "\n*.raw" >> .gitignore

add downloaded data to arc

mv ~/Downloads/Daten\ Linka/Messliste_Wrobel.xlsx _NicolesData/
mv ~/Downloads/Daten\ Linka/*.raw assays/2012_proteome_data_bmfz_stefanski/dataset

sync arc with GitLab

arc sync -m "add raw data from bmfz"