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Lan_2025_Ppd-H1

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  • Please add a valid title for your ArcInvestigation

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    Table of Contents

    1. Studies

    2. Assays

    Graphical overview

    ---
    title: Effects_of_Ppd-H1_and_High_Ambient_Temperatures_in_Barley
    ---
    flowchart TD
        classDef investigationStyle fill:#6c7885,color:#2d3e50,fontWeight:bold;
        classDef studyStyle fill:#62d4c1,color:#2d3e50,fontWeight:bold;
        classDef assayStyle fill:#ffd34d,color:#2d3e50,fontWeight:bold;
        classDef processStyle fill:#D46275,color:#2d3e50;
        id_0["<no-title>"]
        class id_0 investigationStyle;
        id_0-->STUDY_id_1
        class STUDY_id_1 studyStyle;
        subgraph STUDY_id_1[Study: RNAseq_analysis]
        end
        subgraph ASSAY_id_2[Assay: Salmon_quantification]
        end
        class ASSAY_id_2 assayStyle;
        subgraph ASSAY_id_3[Assay: RNAseq_analysis_of_MSA]
        end
        class ASSAY_id_3 assayStyle;
        subgraph ASSAY_id_4[Assay: RNAseq_raw_data]
            id_5[NewTable0]
            class id_5 processStyle;
        end
        class ASSAY_id_4 assayStyle;
        subgraph ASSAY_id_6[Assay: RNAseq_analysis_of_leaf]
        end
        class ASSAY_id_6 assayStyle;
        subgraph ASSAY_id_7[Assay: FASTQC]
            id_5[NewTable0]
            class id_5 processStyle;
        end
        class ASSAY_id_7 assayStyle;
        id_5-->|1|id_5
        id_5-->|389|id_8
        id_8-->|1|id_5
        id_8-->|1|id_8
    

    Additional details

    Meta Data Description
    Submission Date tba
    Public Release Date tba
    Study identifiers RNAseq_analysis
    Study Count 1
    Assay identifiers Salmon_quantification , RNAseq_analysis_of_MSA , RNAseq_raw_data , RNAseq_analysis_of_leaf , FASTQC
    Assay Count 5

    Assay: RNAseq_raw_data

    Additional details

    Meta Data Description
    Measurement Type RNA-Seq
    Technology Type Illumina NovaSeq 6000
    Table Count 1
    Table Names NewTable0
    Sample Count 406
    Data File Count 406
    Associated studies

    Annotation headers

    Parameters: library strategy,library preparation kit,library preparation kit version,adapter sequence,next generation sequencing instrument model,base-calling software,base-calling software version,base-calling software parameters,library strand,Raw data file format

    Assay: FASTQC

    Additional details

    Meta Data Description
    Technology Type FASTQC
    Table Count 1
    Table Names NewTable0
    Sample Count 840
    Data File Count 0
    Associated studies

    Annotation headers

    Characteristics: Format