illumina.md

Source Name	Protocol Type	Protocol REF	Parameter [library strategy]	Parameter [library selection]	Parameter [library layout]	Parameter [library preparation kit]	Parameter [library preparation kit version]	Parameter [adapter sequence]	Parameter [next generation sequencing instrument model]	Parameter [base-calling software]	Parameter [base-calling software version]	Parameter [Raw data file format]	Raw Data File
CAM_01_ext	assay protocol	illumina.md	RNA-seq	cDNA method	single-end	Illumina TruSeq RNA Sample Prep Kit	version 2	CAGATC	Illumina HiSeq 2000	Illumina Cassava	v1.8.2	*.fastq.gz	DB_097_CAMMD_CAGATC_L001_R1_001.fastq.gz
CAM_02_ext	assay protocol	illumina.md	RNA-seq	cDNA method	single-end	Illumina TruSeq RNA Sample Prep Kit	version 2	CTTGTA	Illumina HiSeq 2000	Illumina Cassava	v1.8.2	*.fastq.gz	DB_099_CAMMD_CTTGTA_L001_R1_001.fastq.gz
CAM_03_ext	assay protocol	illumina.md	RNA-seq	cDNA method	single-end	Illumina TruSeq RNA Sample Prep Kit	version 2	AGTCAA	Illumina HiSeq 2000	Illumina Cassava	v1.8.2	*.fastq.gz	DB_103_CAMMD_AGTCAA_L001_R1_001.fastq.gz
reC3_01_ext	assay protocol	illumina.md	RNA-seq	cDNA method	single-end	Illumina TruSeq RNA Sample Prep Kit	version 2	GTCCGC	Illumina HiSeq 2000	Illumina Cassava	v1.8.2	*.fastq.gz	DB_161_reC3MD_GTCCGC_L001_R1_001.fastq.gz
reC3_02_ext	assay protocol	illumina.md	RNA-seq	cDNA method	single-end	Illumina TruSeq RNA Sample Prep Kit	version 2	GTGAAA	Illumina HiSeq 2000	Illumina Cassava	v1.8.2	*.fastq.gz	DB_163_reC3MD_GTGAAA_L001_R1_001.fastq.gz
reC3_03_ext	assay protocol	illumina.md	RNA-seq	cDNA method	single-end	Illumina TruSeq RNA Sample Prep Kit	version 2	GTGAAA	Illumina HiSeq 2000	Illumina Cassava	v1.8.2	*.fastq.gz	DB_165_re-C3MD_GTGAAA_L002_R1_001.fastq.gz