draft figure

_workflow_scheme/README.md

@@ -12,13 +12,18 @@ workflows | #4FB3D9 | #2D3E57 | rhombus
 ```bash
 
 find runs -mindepth 1 -maxdepth 1 -type d | awk '{print $1,"runs", "#C21F3A", "#2D3E69", "ellipse"}' | tr ' ' ',' > tmp.runs.columns.csv
-find assays -mindepth 1 -maxdepth 1 -type d | awk '{print $1,"assays", "#C21F3A", "#2D3E69", "rectangle"}' | tr ' ' ',' > tmp.assays.columns.csv
+find assays -mindepth 1 -maxdepth 1 -type d | awk '{print $1,"assays", "#FFC000", "#2D3E69", "rectangle"}' | tr ' ' ',' > tmp.assays.columns.csv
 find studies -mindepth 1 -maxdepth 1 -type d | awk '{print $1,"studies", "#B4CE82", "#2D3E50", "rectangle"}' | tr ' ' ',' > tmp.studies.columns.csv
 find workflows -mindepth 1 -maxdepth 1 -type d | awk '{print $1,"workflows", "#4FB3D9", "#2D3E57", "rhombus"}' | tr ' ' ',' > tmp.workflows.columns.csv
 
-cat tmp.*.columns.csv
+## append rwo number 
+cat tmp.*.columns.csv | awk -F',' '{$0=$0","NR} 1' > tmp_drawioimport.csv 
 
+awk 'BEGIN{print "step,folder,fill,stroke,shape,id"} {print}' tmp_drawioimport.csv > drawioimport.csv
 
-awk 'BEGIN{printf "Sr No\tName\tSub\tMarks\n"} {print}' drawioimport.csv
 
+cat _workflow_scheme/drawioimport_header drawioimport.csv > drawioimport_ready
+mv drawioimport* _workflow_scheme
+
+rm tmp*
 ```
\ No newline at end of file

_workflow_scheme/drawioimport.csv

+step,folder,fill,stroke,shape,id
+assays/Talinum_RNASeq_minimal,assays,#FFC000,#2D3E69,rectangle,1
+runs/shiny_prep,runs,#C21F3A,#2D3E69,ellipse,2
+runs/kallisto_quant,runs,#C21F3A,#2D3E69,ellipse,3
+runs/merged_isa_metadata,runs,#C21F3A,#2D3E69,ellipse,4
+runs/kallisto_collect,runs,#C21F3A,#2D3E69,ellipse,5
+runs/kallisto_index,runs,#C21F3A,#2D3E69,ellipse,6
+runs/kallisto_sleuth,runs,#C21F3A,#2D3E69,ellipse,7
+studies/TalinumGenomeDraft,studies,#B4CE82,#2D3E50,rectangle,8
+studies/TalinumFacultativeCAM,studies,#B4CE82,#2D3E50,rectangle,9
+workflows/merge_isa_metadata,workflows,#4FB3D9,#2D3E57,rhombus,10
+workflows/shiny_prep,workflows,#4FB3D9,#2D3E57,rhombus,11
+workflows/kallisto_quant,workflows,#4FB3D9,#2D3E57,rhombus,12
+workflows/kallisto_collect,workflows,#4FB3D9,#2D3E57,rhombus,13
+workflows/kallisto_index,workflows,#4FB3D9,#2D3E57,rhombus,14
+workflows/kallisto_sleuth,workflows,#4FB3D9,#2D3E57,rhombus,15

_workflow_scheme/drawioimport_header

+## Hello World
+# label: %step%
+# style: shape=%shape%;fillColor=%fill%;strokeColor=%stroke%;
+# namespace: csvimport-
+# width: auto
+# height: auto
+# padding: 15
+# ignore: id,shape,fill,stroke,folder
+# nodespacing: 40
+# levelspacing: 100
+# edgespacing: 40
+# layout: auto
+## CSV starts under this line

_workflow_scheme/drawioimport_ready

+## Hello World
+# label: %step%
+# style: shape=%shape%;fillColor=%fill%;strokeColor=%stroke%;
+# namespace: csvimport-
+# width: auto
+# height: auto
+# padding: 15
+# ignore: id,shape,fill,stroke,folder
+# nodespacing: 40
+# levelspacing: 100
+# edgespacing: 40
+# layout: auto
+## CSV starts under this line
+step,folder,fill,stroke,shape,id
+assays/Talinum_RNASeq_minimal,assays,#FFC000,#2D3E69,rectangle,1
+runs/shiny_prep,runs,#C21F3A,#2D3E69,ellipse,2
+runs/kallisto_quant,runs,#C21F3A,#2D3E69,ellipse,3
+runs/merged_isa_metadata,runs,#C21F3A,#2D3E69,ellipse,4
+runs/kallisto_collect,runs,#C21F3A,#2D3E69,ellipse,5
+runs/kallisto_index,runs,#C21F3A,#2D3E69,ellipse,6
+runs/kallisto_sleuth,runs,#C21F3A,#2D3E69,ellipse,7
+studies/TalinumGenomeDraft,studies,#B4CE82,#2D3E50,rectangle,8
+studies/TalinumFacultativeCAM,studies,#B4CE82,#2D3E50,rectangle,9
+workflows/merge_isa_metadata,workflows,#4FB3D9,#2D3E57,rhombus,10
+workflows/shiny_prep,workflows,#4FB3D9,#2D3E57,rhombus,11
+workflows/kallisto_quant,workflows,#4FB3D9,#2D3E57,rhombus,12
+workflows/kallisto_collect,workflows,#4FB3D9,#2D3E57,rhombus,13
+workflows/kallisto_index,workflows,#4FB3D9,#2D3E57,rhombus,14
+workflows/kallisto_sleuth,workflows,#4FB3D9,#2D3E57,rhombus,15