Results for commit: ff506329

arc-cwl/arc_specification@2.0.0-draft/badge.svg

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+        <text x="214.5" y="15" fill="#010101" fill-opacity=".3">17/17</text>
+        <text x="213.5" y="14">17/17</text>
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arc-cwl/arc_specification@2.0.0-draft/validation_report.xml

+<?xml version="1.0" encoding="utf-8"?><testsuites><testsuite name="arc-validate"><testcase name="[ Critical; Arc is free of falesly parsed process graph headers in assays ]" time="0.088" /><testcase name="[ Critical; Arc contains study in studies directory ]" time="0.080" /><testcase name="[ Critical; Arc contains assay in assay directory ]" time="0.080" /><testcase name="[ Critical; Arc is free of falesly parsed process graph headers in studies ]" time="0.056" /><testcase name="[ Critical; Arc contains all files linked in studies ]" time="0.046" /><testcase name="[ Critical; Arc contains workflow in workflow directory ]" time="0.037" /><testcase name="[ Critical; Arc contains investigation file ]" time="0.016" /><testcase name="[ Critical; Arc contains Workflows Directory ]" time="0.004" /><testcase name="[ Critical; Arc contains Studies Directory ]" time="0.003" /><testcase name="[ Critical; Arc contains Assays Directory ]" time="0.003" /><testcase name="[ Critical; Arc contains Runs Directory ]" time="0.003" /><testcase name="[ Critical; Arc contains all needed Investigation Metadata fields ]" time="0.003" /><testcase name="[ Critical; Arc contains all needed Study Metadata fields ]" time="0.002" /><testcase name="[ Critical; Arc contains Study optional Metadata fields ]" time="0.002" /><testcase name="[ Critical; Arc contains all needed Assay Metadata fields ]" time="0.001" /><testcase name="[ Critical; Arc contains Investigation optional Metadata fields ]" time="0.001" /><testcase name="[ Critical; Arc contains all files linked in investigation ]" time="0.000" /></testsuite></testsuites>
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arc-cwl/arc_specification@2.0.0-draft/validation_summary.json

+{"Critical":{"HasFailures":false,"Total":17,"Passed":17,"Failed":0,"Errored":0},"NonCritical":{"HasFailures":false,"Total":0,"Passed":0,"Failed":0,"Errored":0},"ValidationPackage":{"Name":"arc_specification","Version":"2.0.0-draft","Summary":"Validate whether an ARC conforms to Specification V2.0.0-draft","Description":"Validate whether an ARC conforms to Specification V2.0.0-draft. See the relevant spec at https://github.com/nfdi4plants/ARC-specification/blob/v2.0.0/ARC%20specification.md"}}
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arc-cwl/invenio@2.1.0/badge.svg

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+        <text x="115.5" y="14">10/10</text>
+    </g>
+</svg>

arc-cwl/invenio@2.1.0/validation_report.xml

+<?xml version="1.0" encoding="utf-8"?><testsuites><testsuite name="fsi"><testcase name="[ Critical; INVESTIGATION; Investigation Title ]" time="0.003" /><testcase name="[ Critical; INVESTIGATION; Investigation Description ]" time="0.003" /><testcase name="[ Critical; INVESTIGATION; Investigation Person First Name exists ]" time="0.003" /><testcase name="[ Critical; INVESTIGATION; Investigation Person First Name is not empty ]" time="0.003" /><testcase name="[ Critical; INVESTIGATION; Investigation Person Last Name exists ]" time="0.003" /><testcase name="[ Critical; INVESTIGATION; Investigation Person Last Name is not empty ]" time="0.003" /><testcase name="[ Critical; INVESTIGATION; Investigation Person Affiliation exists ]" time="0.003" /><testcase name="[ Critical; INVESTIGATION; Investigation Person Affiliation is not empty ]" time="0.003" /><testcase name="[ Critical; INVESTIGATION; Investigation Person Email exists ]" time="0.000" /><testcase name="[ Critical; INVESTIGATION; Investigation Person Email ]" time="0.000" /></testsuite></testsuites>
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arc-cwl/invenio@2.1.0/validation_summary.json

+{"Critical":{"HasFailures":false,"Total":10,"Passed":10,"Failed":0,"Errored":0},"NonCritical":{"HasFailures":false,"Total":0,"Passed":0,"Failed":0,"Errored":0},"ValidationPackage":{"Name":"invenio","Version":"2.1.0","Summary":"Validates if the ARC contains the necessary metadata to be publishable via Invenio.","Description":"Validates if the ARC contains the necessary metadata to be publishable via Invenio.\nThe following metadata is required:\n- Investigation has title and description\n- All persons in Investigation Contacts must have a name, last name, affiliation and valid email\n"}}
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arc-cwl/plant-growth@1.0.0/badge.svg

+<?xml version="1.0" encoding="UTF-8"?>
+<svg xmlns="http://www.w3.org/2000/svg" width="121" height="20">
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+        <text x="43.5" y="15" fill="#010101" fill-opacity=".3">plant-growth</text>
+        <text x="42.5" y="14">plant-growth</text>
+    </g>
+    <g fill="#fff" text-anchor="middle" font-family="DejaVu Sans,Verdana,Geneva,sans-serif" font-size="11">
+        <text x="104" y="15" fill="#010101" fill-opacity=".3">8/17</text>
+        <text x="103" y="14">8/17</text>
+    </g>
+</svg>

arc-cwl/plant-growth@1.0.0/validation_report.xml

+<?xml version="1.0" encoding="utf-8"?><testsuites><testsuite name="fsi"><testcase name="[ NonCritical; cases; plant_material: genotype ]" time="0.003"><failure message="table contains no genotype header" /></testcase><testcase name="[ NonCritical; cases; plant_material: study type ]" time="0.003"><failure message="table contains no study type header" /></testcase><testcase name="[ NonCritical; cases; plant_material: Reference Time Point ]" time="0.003"><failure message="table contains no Reference Time Point header" /></testcase><testcase name="[ NonCritical; cases; plant_material: growth plot design ]" time="0.003"><failure message="table contains no growth plot design header" /></testcase><testcase name="[ NonCritical; cases; plant_material: plant growth medium exposure ]" time="0.003"><failure message="table contains no plant growth medium exposure header" /></testcase><testcase name="[ NonCritical; cases; plant_material: humidity night ]" time="0.002"><failure message="table contains no humidity night header" /></testcase><testcase name="[ NonCritical; cases; plant_material: plant nutrient exposure ]" time="0.002"><failure message="table contains no plant nutrient exposure header" /></testcase><testcase name="[ NonCritical; cases; plant_material: abiotic plant exposure ]" time="0.002"><failure message="table contains no abiotic plant exposure header" /></testcase><testcase name="[ NonCritical; cases; plant_material: biotic plant exposure ]" time="0.000"><failure message="table contains no biotic plant exposure header" /></testcase><testcase name="[ Critical; cases; plant growth table ]" time="0.032" /><testcase name="[ Critical; cases; plant_material: organism ]" time="0.002" /><testcase name="[ Critical; cases; plant_material: growth day length ]" time="0.002" /><testcase name="[ Critical; cases; plant_material: light intensity exposure ]" time="0.002" /><testcase name="[ Critical; cases; plant_material: humidity day ]" time="0.002" /><testcase name="[ Critical; cases; plant_material: temperature day ]" time="0.002" /><testcase name="[ Critical; cases; plant_material: temperature night ]" time="0.002" /><testcase name="[ Critical; cases; plant_material: watering exposure ]" time="0.002" /></testsuite></testsuites>
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arc-cwl/plant-growth@1.0.0/validation_summary.json

+{"Critical":{"HasFailures":false,"Total":8,"Passed":8,"Failed":0,"Errored":0},"NonCritical":{"HasFailures":true,"Total":9,"Passed":0,"Failed":9,"Errored":0},"ValidationPackage":{"Name":"plant-growth","Version":"1.0.0","Summary":"Validates if the ARC contains the necessary metadata to describe conditions for plant growth.","Description":"Validates if the ARC contains an annotation table with protocol type \u0022Plant Growth Protocol\u0022 and if it exists, whether it contains the following fields:\n\n    Critical fields:\n    - organism (OBI:0100026)\n    - growth day length (DPBO:0000041)\n    - light intensity exposure (PECO:0007224)        \n    - temperature day (DPBO:0000007)\n    - temperature night (DPBO:0000008)       \n\n    Non critical fields:\n    - genotype (EFO:0000513)\n    - study type (PECO:0007231)\n    - Reference Time Point (NCIT:C82576)\n    - growth plot design (DPBO:0000001)\n    - plant growth medium exposure (PECO:0007147)\n    - humidity day (DPBO:0000005)\n    - humidity night (DPBO:0000006)\n    - plant nutrient exposure (PECO:0007241)\n    - abiotic plant exposure (PECO:0007191)\n    - biotic plant exposure (PECO:0007357)\n    - watering exposure (PECO:0007383)\n"}}
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