README.md

TalinumFacultativeCAM.study.xlsx

assays/Talinum_RNASeq_minimal/README.md

..._minimal/dataset/DB_097_CAMMD_CAGATC_L001_R1_001.fastq.gz

..._minimal/dataset/DB_099_CAMMD_CTTGTA_L001_R1_001.fastq.gz

..._minimal/dataset/DB_103_CAMMD_AGTCAA_L001_R1_001.fastq.gz

...minimal/dataset/DB_161_reC3MD_GTCCGC_L001_R1_001.fastq.gz

...minimal/dataset/DB_163_reC3MD_GTGAAA_L001_R1_001.fastq.gz

...inimal/dataset/DB_165_re-C3MD_GTGAAA_L002_R1_001.fastq.gz

assays/Talinum_RNASeq_minimal/isa.assay.xlsx

assays/Talinum_RNASeq_minimal/protocols/01_plant_material.md

...ys/Talinum_RNASeq_minimal/protocols/02_RNAex_libraries.md

assays/Talinum_RNASeq_minimal/protocols/README.md

externals/README.md

isa.investigation.xlsx

workflows/01_KallistoQuant.sh

workflows/03_KallistoCollect.R

workflows/04_Sleuth.R

workflows/05_plot_shinyPrep.R

workflows/05_plotshinyPrep/05_plot_shinyPrep.R