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Commit 84e3c25c authored by Dominik Brilhaus's avatar Dominik Brilhaus
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# SampleARC RNAseq # Facultative CAM in Talinum
This is a minimal example ARC packaging an mRNA-Seq dataset with metadata and computations.
:bulb: Check out the [wiki](https://git.nfdi4plants.org/brilator/samplearc_rnaseq/-/wikis/home) to this project for more information. :bulb: Check out the [wiki](https://git.nfdi4plants.org/brilator/samplearc_rnaseq/-/wikis/home) to this project for more information.
## Data origin ## Data origin
- see [./isa.investigation.xlsx](./isa.investigation.xlsx) for details. - see [./isa.investigation.xlsx](./isa.investigation.xlsx) for details.
- Published under: <https://doi.org/10.1104/pp.15.01076> - Adapted from
> Brilhaus, D., Bräutigam, A., Mettler-Altmann, T., Winter, K., and Weber, A.P.M. (2016). Reversible Burst of Transcriptional Changes during Induction of Crassulacean Acid Metabolism in Talinum triangulare. Plant Physiology 170: 102–122. https://doi.org/10.1104/pp.15.01076
- studies/TalinumGenomeDraft originates from https://git.nfdi4plants.org/hhu-plant-biochemistry/talinum-fruticosum-genome
## Workflow overview ## RNASeq Workflow overview
![](_workflow_scheme/workflow-scheme.drawio.png) ![](_workflow_scheme/workflow-scheme.drawio.png)
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