.gitattributes

runs/kallisto_collect/run.yml

runs/kallisto_sleuth/isa.dataset.xlsx

runs/kallisto_sleuth/run.yml

runs/merged_isa_metadata/out/merged_isa.tsv

runs/merged_isa_metadata/run.cwl

runs/merged_isa_metadata/run.yml

runs/shiny_prep/run.yml

runs/sleuth/results/kallisto_df.csv

runs/sleuth/results/kallisto_mappingStats.csv

runs/sleuth/results/kallisto_sleuthObject.RData

runs/sleuth/results/kallisto_tpmMatrix.csv

runs/sleuth/results/sleuth_dge.csv

runs/sleuth/run.cwl

runs/sleuth/run.yml

workflows/deseq2/README.md

workflows/kallisto_sleuth/kallisto_sleuth.R

workflows/kallisto_sleuth/kallisto_sleuth.cwl

workflows/merge_isa_metadata/merge_isa_metadata.R

workflows/sleuth/Dockerfile