runs/kallisto_quant/README.md

runs/kallisto_quant/kallisto_quant.yml

runs/shiny_prep/shiny_prep.RData

runs/shiny_prep/shiny_prep.yml

workflows/kallisto_quant.cwl

workflows/kallisto_quant.sh

workflows/no_CWL_yet/kallisto_sleuth/01_KallistoIndex.sh

workflows/no_CWL_yet/kallisto_sleuth/01_KallistoQuant.sh

workflows/no_CWL_yet/kallisto_sleuth/02_InstallPackages.R

workflows/no_CWL_yet/kallisto_sleuth/03_KallistoCollect.R

workflows/no_CWL_yet/kallisto_sleuth/04_Sleuth.R

workflows/no_CWL_yet/kallisto_sleuth/05_plot_shinyPrep.R

workflows/no_CWL_yet/kallisto_sleuth_wrapper.sh

workflows/shiny_prep.R

workflows/shiny_prep.cwl