Cwl

re-designed a bunch of CWL

.gitattributes

@@ -29,51 +29,6 @@
 runs/kallisto_collect/kallisto_df.csv filter=lfs diff=lfs merge=lfs -text
 runs/kallisto_sleuth/sleuth_dge.csv filter=lfs diff=lfs merge=lfs -text
 studies/TalinumGenomeDraft/resources/Talinum.gm.CDS.nt.fa filter=lfs diff=lfs merge=lfs -text
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 runs/kallisto_collect/kallisto_sleuthObject.RData filter=lfs diff=lfs merge=lfs -text
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 runs/kallisto_collect/out/kallisto_sleuthObject.RData filter=lfs diff=lfs merge=lfs -text
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-runs/kallisto_sleuth/run2/03_kallisto_df.csv filter=lfs diff=lfs merge=lfs -text
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-runs/kallisto_sleuth/run2/03_kallisto_sleuthObject.RData filter=lfs diff=lfs merge=lfs -text
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+runs/kallisto/kallisto_results/** filter=lfs diff=lfs merge=lfs -text
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