Cwl

re-designed a bunch of CWL

runs/kallisto/README.md

@@ -4,5 +4,6 @@
 
 ```bash
 cd runs/kallisto/
-cwltool ../../workflows/kallisto/kallisto-index.cwl index.yml
-```
\ No newline at end of file
+cwltool --cachedir cache2 ../../workflows/kallisto/kallisto-workflow.cwl workflow.yml > $(date +"%Y-%m-%d_%H-%M").log 2>&1 &
+```
+