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Commit 2fa3ff0d authored by Mekhrona Mirzoeva's avatar Mekhrona Mirzoeva
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renamed Metabolomics assay, antiSMASH v6.0 assay added

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_publication/pnas.2221508120.sapp.pdf filter=lfs diff=lfs merge=lfs -text _publication/pnas.2221508120.sapp.pdf filter=lfs diff=lfs merge=lfs -text
_publication/dataverse_files/Table[[:space:]]S2.xlsx filter=lfs diff=lfs merge=lfs -text _publication/dataverse_files/Table[[:space:]]S2.xlsx filter=lfs diff=lfs merge=lfs -text
assays/Screen[[:space:]]for[[:space:]]antagonistic[[:space:]]interbacterial[[:space:]]interactions/dataset/Table[[:space:]]S2.xlsx filter=lfs diff=lfs merge=lfs -text assays/Screen[[:space:]]for[[:space:]]antagonistic[[:space:]]interbacterial[[:space:]]interactions/dataset/Table[[:space:]]S2.xlsx filter=lfs diff=lfs merge=lfs -text
assays/BGC[[:space:]]prediction[[:space:]]using[[:space:]]antiSMASH/dataset/Table[[:space:]]S2.xlsx filter=lfs diff=lfs merge=lfs -text
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## BGC prediction using antiSMASH
Bacterial genomes were downloaded from “www.at-sphere.com” or NCBI and https://antismash.secondarymetabolites.org/ version 6.0. Output data from antiSMASH analysis are listed as BGC classes and predicted BGCs for each genome in **Table S2**. Only high-quality genomes, as assessed by CheckM with ≥90% completeness and ≤5% contamination ratio were used for the analysis. For R401, the PacBio-sequenced high-quality genome was used for BGC prediction using antiSMASH.
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