initiate ARC based on publication

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+**/dataset/** filter=lfs diff=lfs merge=lfs -text
+/_publication/Von[[:space:]]Dahlen[[:space:]]et[[:space:]]al.[[:space:]]-[[:space:]]2023[[:space:]]-[[:space:]]Global[[:space:]]expression[[:space:]]patterns[[:space:]]of[[:space:]]R-genes[[:space:]]in[[:space:]]tomato[[:space:]]an.pdf filter=lfs diff=lfs merge=lfs -text

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_publication/dahlen2023.bib

+
+@article{von_dahlen_global_2023,
+	title = {Global expression patterns of {R}-genes in tomato and potato},
+	volume = {14},
+	issn = {1664-462X},
+	url = {https://www.frontiersin.org/articles/10.3389/fpls.2023.1216795/full},
+	doi = {10.3389/fpls.2023.1216795},
+	abstract = {Introduction
+              
+                As key-players of plant immunity, the proteins encoded by resistance genes (
+                R
+                -genes) recognize pathogens and initiate pathogen-specific defense responses. The expression of some
+                R
+                -genes carry fitness costs and therefore inducible immune responses are likely advantageous. To what degree inducible resistance driven by
+                R
+                -genes is triggered by pathogen infection is currently an open question.
+              
+            
+            
+              Methods
+              
+                In this study we analyzed the expression of 940
+                R
+                -genes of tomato and potato across 315 transcriptome libraries to investigate how interspecific interactions with microbes influence
+                R
+                -gene expression in plants.
+              
+            
+            
+              Results
+              
+                We found that most
+                R
+                -genes are expressed at a low level. A small subset of
+                R
+                -genes had moderate to high levels of expression and were expressed across many independent libraries, irrespective of infection status. These
+                R
+                -genes include members of the class of genes called NRCs (NLR required for cell death). Approximately 10\% of all
+                R
+                -genes were differentially expressed during infection and this included both up- and down-regulation. One factor associated with the large differences in
+                R
+                -gene expression was host tissue, reflecting a considerable degree of tissue-specific transcriptional regulation of this class of genes.
+              
+            
+            
+              Discussion
+              
+                These results call into question the widespread view that
+                R
+                -gene expression is induced upon pathogen attack. Instead, a small core set of
+                R
+                -genes is constitutively expressed, imparting upon the plant a ready-to-detect and defend status.},
+	urldate = {2024-06-21},
+	journal = {Frontiers in Plant Science},
+	author = {Von Dahlen, Janina K. and Schulz, Kerstin and Nicolai, Jessica and Rose, Laura E.},
+	month = oct,
+	year = {2023},
+	pages = {1216795},
+	file = {Full Text:files/21041/Von Dahlen et al. - 2023 - Global expression patterns of R-genes in tomato an.pdf:application/pdf},
+}