Commits on Source (5)
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Sebastian Triesch authored
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Sebastian Triesch authored
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Sebastian Triesch authored
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Sebastian Triesch authored632c4be4
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Sebastian Triesch authored
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- README.md 204 additions, 0 deletionsREADME.md
- S1_species.xlsx 0 additions, 0 deletionsS1_species.xlsx
- S2_nt_spanned_by_TEs.xlsx 0 additions, 0 deletionsS2_nt_spanned_by_TEs.xlsx
- S3_LTR_ages.xlsx 0 additions, 0 deletionsS3_LTR_ages.xlsx
- S4_upstream_p_values.xlsx 0 additions, 0 deletionsS4_upstream_p_values.xlsx
- S6_M_Boxes.xlsx 0 additions, 0 deletionsS6_M_Boxes.xlsx
- assays/README.md 1 addition, 0 deletionsassays/README.md
- runs/.ipynb_checkpoints/Fig6_matrix-checkpoint.csv 15 additions, 0 deletionsruns/.ipynb_checkpoints/Fig6_matrix-checkpoint.csv
- runs/Fig5_data.tsv 65 additions, 0 deletionsruns/Fig5_data.tsv
- runs/Fig6_matrix.csv 15 additions, 0 deletionsruns/Fig6_matrix.csv
- runs/Fig6_species.txt 16 additions, 0 deletionsruns/Fig6_species.txt
- runs/association_gff/downstream/.ipynb_checkpoints/m_arvensis_te_gene_associaton-checkpoint.gff3 224 additions, 0 deletions...checkpoints/m_arvensis_te_gene_associaton-checkpoint.gff3
- runs/association_gff/downstream/a_alpina_te_gene_associaton.gff3 648 additions, 0 deletions...sociation_gff/downstream/a_alpina_te_gene_associaton.gff3
- runs/association_gff/downstream/a_thaliana_te_gene_associaton.gff3 83 additions, 0 deletions...ciation_gff/downstream/a_thaliana_te_gene_associaton.gff3
- runs/association_gff/downstream/b_gravinae_unkown_te_gene_associaton.gff3 840 additions, 0 deletions..._gff/downstream/b_gravinae_unkown_te_gene_associaton.gff3
- runs/association_gff/downstream/b_oleracea_te_gene_associaton.gff3 493 additions, 0 deletions...ciation_gff/downstream/b_oleracea_te_gene_associaton.gff3
- runs/association_gff/downstream/b_tournefortii_te_gene_associaton.gff3 81 additions, 0 deletions...ion_gff/downstream/b_tournefortii_te_gene_associaton.gff3
- runs/association_gff/downstream/c_annua_te_gene_associaton.gff3 634 additions, 0 deletions...ssociation_gff/downstream/c_annua_te_gene_associaton.gff3
- runs/association_gff/downstream/c_gynandra_te_gene_associaton.gff3 840 additions, 0 deletions...ciation_gff/downstream/c_gynandra_te_gene_associaton.gff3
- runs/association_gff/downstream/d_erucoides_te_gene_associaton.gff3 752 additions, 0 deletions...iation_gff/downstream/d_erucoides_te_gene_associaton.gff3
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README.md
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S1_species.xlsx
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S2_nt_spanned_by_TEs.xlsx
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S3_LTR_ages.xlsx
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S4_upstream_p_values.xlsx
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S6_M_Boxes.xlsx
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assays/README.md
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runs/Fig5_data.tsv
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runs/Fig6_matrix.csv
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runs/Fig6_species.txt
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