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Commit 6f5a33ab authored by Moritz Schladt's avatar Moritz Schladt
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sync changes via ARCCommander

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    Stage: quality_report_generator
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      ......@@ -3036,3 +3036,65 @@ assays/transient[[:space:]]localization/nico[[:space:]]leaves[[:space:]]ab[[:spa
      assays/transient[[:space:]]localization/nico[[:space:]]leaves[[:space:]]ab[[:space:]]and[[:space:]]PI[[:space:]]9.czi filter=lfs diff=lfs merge=lfs -text
      assays/transient[[:space:]]localization/nico[[:space:]]leaves[[:space:]]only[[:space:]]PI[[:space:]]1.czi filter=lfs diff=lfs merge=lfs -text
      assays/transient[[:space:]]localization/nico[[:space:]]leaves[[:space:]]only[[:space:]]PI[[:space:]]2.czi filter=lfs diff=lfs merge=lfs -text
      **/dataset/** filter=lfs diff=lfs merge=lfs -text
      /assays/bombardment/20210126_Col0-WT_leaf1-4_2xGFP_24h-4laser_680gain_zsacks.czi filter=lfs diff=lfs merge=lfs -text
      /assays/bombardment/20210126_Col0-WT_leaf1-4_v2_2xGFP_24h-7laser_680gain_zsacks.czi filter=lfs diff=lfs merge=lfs -text
      /assays/bombardment/20210126_Col0-WT_leaf5-7_2xGFP_24h_7laser_680gain_zstacks.czi filter=lfs diff=lfs merge=lfs -text
      /assays/bombardment/20230112_WT_2xGFP_Col0_24h[[:space:]]post_z.czi filter=lfs diff=lfs merge=lfs -text
      /assays/bombardment/20230117_WT_Col0_2xGFP_24h_zstack.czi filter=lfs diff=lfs merge=lfs -text
      /assays/bombardment/20230307_Col0-WT_our_2xGFP_24h_Zstack.czi filter=lfs diff=lfs merge=lfs -text
      /assays/bombardment/20230314_Col0_WT_2xGFP_24h_Tiles.czi filter=lfs diff=lfs merge=lfs -text
      /assays/bombardment/20230314_Col0_WT_2xGFP_24h_zstack.czi filter=lfs diff=lfs merge=lfs -text
      /assays/bombardment/20230328_WT_Fatiha_2xGFP_24h_tile[[:space:]]positions.czi filter=lfs diff=lfs merge=lfs -text
      /assays/bombardment/20230328_WT_Fatiha_2xGFP_24h_zstack[[:space:]]54[[:space:]]positions.czi filter=lfs diff=lfs merge=lfs -text
      /assays/bombardment/20230328_WT_Guido_2xGFP_24h_tile[[:space:]]positions.czi filter=lfs diff=lfs merge=lfs -text
      /assays/bombardment/20230328_WT_Guido_2xGFP_24h_z[[:space:]]stack[[:space:]]20[[:space:]]positions.czi filter=lfs diff=lfs merge=lfs -text
      /assays/bombardment/20230328_WT_homobox_2xGFP_24h_tile[[:space:]]positions.czi filter=lfs diff=lfs merge=lfs -text
      /assays/bombardment/20230328_WT_homobox_2xGFP_24h_zstack[[:space:]]76[[:space:]]positions.czi filter=lfs diff=lfs merge=lfs -text
      /assays/bombardment/20230406_Col0_WT_guido_2xGFP_24h_leaves_z_stack.czi filter=lfs diff=lfs merge=lfs -text
      /assays/bombardment/20230427_WT_2xGFP_24h_positions.czi filter=lfs diff=lfs merge=lfs -text
      /assays/bombardment/20230427_WT_2xGFP_24h_zstack[[:space:]]25[[:space:]]positions.czi filter=lfs diff=lfs merge=lfs -text
      /assays/bombardment/20230803_CPR5[[:space:]]G420D_old[[:space:]]light_lowest[[:space:]]level_2xGFP.czi filter=lfs diff=lfs merge=lfs -text
      /assays/bombardment/20230803_CPR5[[:space:]]G420D_old[[:space:]]light_lowest[[:space:]]level_2xGFP_preview.czi filter=lfs diff=lfs merge=lfs -text
      /assays/bombardment/20230803_WT_new[[:space:]]light_2xGFP.czi filter=lfs diff=lfs merge=lfs -text
      /assays/bombardment/20230803_WT_new[[:space:]]light_2xGFP_preview.czi filter=lfs diff=lfs merge=lfs -text
      /assays/bombardment/20230803_WT_old[[:space:]]light_lowest[[:space:]]level_2xGFP.czi filter=lfs diff=lfs merge=lfs -text
      /assays/bombardment/20230803_WT_old[[:space:]]light_lowest[[:space:]]level_2xGFP_preview.czi filter=lfs diff=lfs merge=lfs -text
      /assays/bombardment/20230803_WT_old[[:space:]]light_upper[[:space:]]level_2xGFP.czi filter=lfs diff=lfs merge=lfs -text
      /assays/bombardment/20230830_CPR5[[:space:]]T3_high[[:space:]]light_2xGF_positions.czi filter=lfs diff=lfs merge=lfs -text
      /assays/bombardment/20230830_CPR5[[:space:]]T3_high[[:space:]]light_2xGF_zstacks.czi filter=lfs diff=lfs merge=lfs -text
      /assays/bombardment/20230830_CPR5[[:space:]]T3_low[[:space:]]light_2xGFP_positions.czi filter=lfs diff=lfs merge=lfs -text
      /assays/bombardment/20230830_CPR5[[:space:]]T3_low[[:space:]]light_2xGFP_zstacks.czi filter=lfs diff=lfs merge=lfs -text
      /assays/bombardment/20230830_WT_high[[:space:]]light_2xGF_positions.czi filter=lfs diff=lfs merge=lfs -text
      /assays/bombardment/20230830_WT_high[[:space:]]light_2xGF_zstacks.czi filter=lfs diff=lfs merge=lfs -text
      /assays/bombardment/20230919_cpr5[[:space:]]T3_2x[[:space:]]GFP_lowest[[:space:]]shelf_low[[:space:]]light_A.[[:space:]]thaliana_4[[:space:]]weeks_24[[:space:]]hpb_positions.czi filter=lfs diff=lfs merge=lfs -text
      /assays/bombardment/20230919_cpr5[[:space:]]T3_2x[[:space:]]GFP_lowest[[:space:]]shelf_low[[:space:]]light_A.[[:space:]]thaliana_4[[:space:]]weeks_24[[:space:]]hpb_stacks.czi filter=lfs diff=lfs merge=lfs -text
      /assays/bombardment/20230919_cpr5[[:space:]]T3_2x[[:space:]]GFP_upper[[:space:]]shelf_high[[:space:]]light_A.[[:space:]]thaliana_4[[:space:]]weeks_24[[:space:]]hpb_positions.czi filter=lfs diff=lfs merge=lfs -text
      /assays/bombardment/20230919_cpr5[[:space:]]T3_2x[[:space:]]GFP_upper[[:space:]]shelf_high[[:space:]]light_A.[[:space:]]thaliana_4[[:space:]]weeks_24[[:space:]]hpb_stacks.czi filter=lfs diff=lfs merge=lfs -text
      /assays/bombardment/20231027_cpr5[[:space:]]T3_2x_shelf[[:space:]]II_[[:space:]]new[[:space:]]light_A.[[:space:]]thaliana_4[[:space:]]weeks_24[[:space:]]hpb_positions.czi filter=lfs diff=lfs merge=lfs -text
      /assays/bombardment/20231027_cpr5[[:space:]]T3_2x_shelf[[:space:]]II_[[:space:]]new[[:space:]]light_A.[[:space:]]thaliana_4[[:space:]]weeks_24[[:space:]]hpb_stacks.czi filter=lfs diff=lfs merge=lfs -text
      /assays/bombardment/A.[[:space:]]thaliana_CPR5[[:space:]]point[[:space:]]mutation[[:space:]]line_short[[:space:]]day_28[[:space:]]days[[:space:]]after[[:space:]]plating_3xmCherry+2xmEGFP_1100[[:space:]]psi_24h[[:space:]]post[[:space:]]bomb_tile[[:space:]]positions.czi filter=lfs diff=lfs merge=lfs -text
      /assays/bombardment/A.[[:space:]]thaliana_CPR5[[:space:]]point[[:space:]]mutation[[:space:]]line_short[[:space:]]day_28[[:space:]]days[[:space:]]after[[:space:]]plating_3xmCherry+2xmEGFP_1100[[:space:]]psi_24h[[:space:]]post[[:space:]]bomb_z[[:space:]]stack[[:space:]]53[[:space:]]positions.czi filter=lfs diff=lfs merge=lfs -text
      /assays/bombardment/A.[[:space:]]thaliana_CPR5[[:space:]]point[[:space:]]mutation[[:space:]]line_short[[:space:]]day_36[[:space:]]days[[:space:]]after[[:space:]]plating_3xmCherry+2xmEGFP_1100[[:space:]]psi_24h[[:space:]]post[[:space:]]bomb_z-stack[[:space:]]20[[:space:]]positions.czi filter=lfs diff=lfs merge=lfs -text
      /assays/bombardment/CPR5G420D_new[[:space:]]light_2xGFP[[:space:]]_zstack.czi filter=lfs diff=lfs merge=lfs -text
      /assays/bombardment/CPR5G420D_new[[:space:]]light_2xGFP_positions.czi filter=lfs diff=lfs merge=lfs -text
      /assays/bombardment/WT_new[[:space:]]light_2xGFP_[[:space:]]ztsack_je.czi filter=lfs diff=lfs merge=lfs -text
      /assays/bombardment/WT_new[[:space:]]light_2xGFP_positions.czi filter=lfs diff=lfs merge=lfs -text
      /assays/SIM/20231110_XVECPR5mCitrine_PDLP5mScarlet_Anilin_4.czi filter=lfs diff=lfs merge=lfs -text
      /assays/SIM/20240112_XVECPR5mCitrine_PDLP5mScarlet_Anilin_10_twoexpressing[[:space:]]cells.czi filter=lfs diff=lfs merge=lfs -text
      /assays/SIM/20240112_XVECPR5mCitrine_PDLP5mScarlet_Anilin_4.czi filter=lfs diff=lfs merge=lfs -text
      /assays/SIM/20240112_XVECPR5mCitrine_PDLP5mScarlet_Anilin_8_twoexpressing[[:space:]]cells.czi filter=lfs diff=lfs merge=lfs -text
      /assays/topology/Experiment-1317.czi filter=lfs diff=lfs merge=lfs -text
      /assays/topology/Experiment-1318.czi filter=lfs diff=lfs merge=lfs -text
      /assays/topology/Experiment-1319.czi filter=lfs diff=lfs merge=lfs -text
      /assays/topology/Experiment-1321.czi filter=lfs diff=lfs merge=lfs -text
      /assays/topology/Experiment-1322.czi filter=lfs diff=lfs merge=lfs -text
      /assays/topology/Experiment-1323.czi filter=lfs diff=lfs merge=lfs -text
      /assays/topology/Experiment-1355.czi filter=lfs diff=lfs merge=lfs -text
      /assays/topology/Experiment-1356.czi filter=lfs diff=lfs merge=lfs -text
      /assays/topology/Experiment-1357.czi filter=lfs diff=lfs merge=lfs -text
      /assays/topology/Experiment-1358.czi filter=lfs diff=lfs merge=lfs -text
      /assays/topology/Experiment-1359.czi filter=lfs diff=lfs merge=lfs -text
      /assays/topology/Experiment-1360.czi filter=lfs diff=lfs merge=lfs -text
      /assays/topology/Experiment-1361.czi filter=lfs diff=lfs merge=lfs -text
      /assays/topology/Experiment-1362.czi filter=lfs diff=lfs merge=lfs -text
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