add RNA-Seq analysis results (c091c911) · Commits · MAdLand / Physcomitrium patens light signaling 2022

Commit c091c911 authored 1 year ago by Saskia Hiltemann

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add RNA-Seq analysis results

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runs/RNA-Seq_analysis/DEGs/31315.p.sort.counts 31316 additions, 0 deletions

runs/RNA-Seq_analysis/DEGs/31315.p.sort.counts
runs/RNA-Seq_analysis/DEGs/31315.p.sort.rpkm 31316 additions, 0 deletions

runs/RNA-Seq_analysis/DEGs/31315.p.sort.rpkm
runs/RNA-Seq_analysis/DEGs/31315.p.sort.wo_zero.counts 25782 additions, 0 deletions

runs/RNA-Seq_analysis/DEGs/31315.p.sort.wo_zero.counts
runs/RNA-Seq_analysis/DEGs/31315.p.sort.wo_zero.rpkm 25782 additions, 0 deletions

runs/RNA-Seq_analysis/DEGs/31315.p.sort.wo_zero.rpkm
runs/RNA-Seq_analysis/DEGs/DEGs_0.9/WT_D_WT_L/DEGpipe_WT_D vs. WT_L.log 1444 additions, 0 deletions

...nalysis/DEGs/DEGs_0.9/WT_D_WT_L/DEGpipe_WT_D vs. WT_L.log
runs/RNA-Seq_analysis/DEGs/DEGs_0.9/WT_D_WT_L/DESeq2/WT_D vs. WT_L_11922_DESeq2_fdr.tsv 11923 additions, 0 deletions

...s_0.9/WT_D_WT_L/DESeq2/WT_D vs. WT_L_11922_DESeq2_fdr.tsv
runs/RNA-Seq_analysis/DEGs/DEGs_0.9/WT_D_WT_L/DESeq2/plots/WT_D vs. WT_L DESeq2 - DispEsts 0 additions, 0 deletions

....9/WT_D_WT_L/DESeq2/plots/WT_D vs. WT_L DESeq2 - DispEsts
runs/RNA-Seq_analysis/DEGs/DEGs_0.9/WT_D_WT_L/DESeq2/plots/WT_D vs. WT_L DESeq2 - PCA 0 additions, 0 deletions

...EGs_0.9/WT_D_WT_L/DESeq2/plots/WT_D vs. WT_L DESeq2 - PCA
runs/RNA-Seq_analysis/DEGs/DEGs_0.9/WT_D_WT_L/DESeq2/plots/WT_D vs. WT_L DESeq2 - SdPlot.1 0 additions, 0 deletions

....9/WT_D_WT_L/DESeq2/plots/WT_D vs. WT_L DESeq2 - SdPlot.1
runs/RNA-Seq_analysis/DEGs/DEGs_0.9/WT_D_WT_L/DESeq2/plots/WT_D vs. WT_L DESeq2 - SdPlot.2 0 additions, 0 deletions

....9/WT_D_WT_L/DESeq2/plots/WT_D vs. WT_L DESeq2 - SdPlot.2
runs/RNA-Seq_analysis/DEGs/DEGs_0.9/WT_D_WT_L/DESeq2/plots/WT_D vs. WT_L DESeq2 - SdPlot.3 0 additions, 0 deletions

....9/WT_D_WT_L/DESeq2/plots/WT_D vs. WT_L DESeq2 - SdPlot.3
runs/RNA-Seq_analysis/DEGs/DEGs_0.9/WT_D_WT_L/NOISeq/WT_D vs. WT_L_4189_NOISeq_nnorm_prob.tsv 4190 additions, 0 deletions

...WT_D_WT_L/NOISeq/WT_D vs. WT_L_4189_NOISeq_nnorm_prob.tsv
runs/RNA-Seq_analysis/DEGs/DEGs_0.9/WT_D_WT_L/NOISeq/WT_D vs. WT_L_7773_NOISeq_rpkm_prob.tsv 7774 additions, 0 deletions

.../WT_D_WT_L/NOISeq/WT_D vs. WT_L_7773_NOISeq_rpkm_prob.tsv
runs/RNA-Seq_analysis/DEGs/DEGs_0.9/WT_D_WT_L/NOISeq/WT_D vs. WT_L_7801_NOISeq_tmm_prob.tsv 7802 additions, 0 deletions

...9/WT_D_WT_L/NOISeq/WT_D vs. WT_L_7801_NOISeq_tmm_prob.tsv
runs/RNA-Seq_analysis/DEGs/DEGs_0.9/WT_D_WT_L/NOISeq/WT_D vs. WT_L_8967_NOISeqbio_rpkm_prob_seed_12345.tsv 8968 additions, 0 deletions

...Seq/WT_D vs. WT_L_8967_NOISeqbio_rpkm_prob_seed_12345.tsv
runs/RNA-Seq_analysis/DEGs/DEGs_0.9/WT_D_WT_L/NOISeq/WT_D vs. WT_L_9187_NOISeqbio_tmm_prob_seed_12345.tsv 9188 additions, 0 deletions

...ISeq/WT_D vs. WT_L_9187_NOISeqbio_tmm_prob_seed_12345.tsv
runs/RNA-Seq_analysis/DEGs/DEGs_0.9/WT_D_WT_L/NOISeq/plots/WT_D vs. WT_L NOISeq - DE.nnorm_0.9_MD 0 additions, 0 deletions

..._WT_L/NOISeq/plots/WT_D vs. WT_L NOISeq - DE.nnorm_0.9_MD
runs/RNA-Seq_analysis/DEGs/DEGs_0.9/WT_D_WT_L/NOISeq/plots/WT_D vs. WT_L NOISeq - DE.nnorn_0.8 0 additions, 0 deletions

...T_D_WT_L/NOISeq/plots/WT_D vs. WT_L NOISeq - DE.nnorn_0.8
runs/RNA-Seq_analysis/DEGs/DEGs_0.9/WT_D_WT_L/NOISeq/plots/WT_D vs. WT_L NOISeq - DE.nnorn_0.9 0 additions, 0 deletions

...T_D_WT_L/NOISeq/plots/WT_D vs. WT_L NOISeq - DE.nnorn_0.9
runs/RNA-Seq_analysis/DEGs/DEGs_0.9/WT_D_WT_L/NOISeq/plots/WT_D vs. WT_L NOISeq - DE.rpkm_0.8 0 additions, 0 deletions

...WT_D_WT_L/NOISeq/plots/WT_D vs. WT_L NOISeq - DE.rpkm_0.8

with 165485 additions and 0 deletions

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